Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Trafficking protein particle complex subunit 1

Gene

TRAPPC1

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

May play a role in vesicular transport from endoplasmic reticulum to Golgi.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

ER-Golgi transport, Transport

Enzyme and pathway databases

ReactomeiR-BTA-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.

Names & Taxonomyi

Protein namesi
Recommended name:
Trafficking protein particle complex subunit 1
Gene namesi
Name:TRAPPC1
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 19

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Golgi apparatus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 145145Trafficking protein particle complex subunit 1PRO_0000260207Add
BLAST

Proteomic databases

PaxDbiQ17QI1.
PRIDEiQ17QI1.

Expressioni

Gene expression databases

BgeeiENSBTAG00000047214.

Interactioni

Subunit structurei

Part of the multisubunit TRAPP (transport protein particle) complex.By similarity

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000055462.

Structurei

3D structure databases

ProteinModelPortaliQ17QI1.
SMRiQ17QI1. Positions 2-142.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3368. Eukaryota.
ENOG4111X41. LUCA.
GeneTreeiENSGT00510000047863.
HOVERGENiHBG056032.
InParanoidiQ17QI1.
KOiK20300.
OMAiFYETPAN.
OrthoDBiEOG091G0RVD.
TreeFamiTF323681.

Family and domain databases

InterProiIPR011012. Longin-like_dom.
IPR007233. TRAPPC.
[Graphical view]
PANTHERiPTHR23249. PTHR23249. 1 hit.
PfamiPF04099. Sybindin. 1 hit.
[Graphical view]
SMARTiSM01399. Sybindin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.

Sequencei

Sequence statusi: Complete.

Q17QI1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVHNLYLFD RNGVCLHYSE WHRKKQAGIP KEEEYKLMYG MLFSIRSFVS
60 70 80 90 100
KMSPLDMKDG FLAFQTSRYK LHYYETPTGI KVVMNTDLGV GPIRDVLHHI
110 120 130 140
YSALYVELVV KNPLCPLGQT VQSELFRSRL DSYVRSLPFF SARAG
Length:145
Mass (Da):16,832
Last modified:July 25, 2006 - v1
Checksum:i7C8C81D3F0E8DCC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118345 mRNA. Translation: AAI18346.1.
RefSeqiNP_001069881.1. NM_001076413.2.
XP_005220452.1. XM_005220395.3.
UniGeneiBt.22552.

Genome annotation databases

EnsembliENSBTAT00000065281; ENSBTAP00000055462; ENSBTAG00000047214.
GeneIDi616205.
KEGGibta:616205.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118345 mRNA. Translation: AAI18346.1.
RefSeqiNP_001069881.1. NM_001076413.2.
XP_005220452.1. XM_005220395.3.
UniGeneiBt.22552.

3D structure databases

ProteinModelPortaliQ17QI1.
SMRiQ17QI1. Positions 2-142.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000055462.

Proteomic databases

PaxDbiQ17QI1.
PRIDEiQ17QI1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000065281; ENSBTAP00000055462; ENSBTAG00000047214.
GeneIDi616205.
KEGGibta:616205.

Organism-specific databases

CTDi58485.

Phylogenomic databases

eggNOGiKOG3368. Eukaryota.
ENOG4111X41. LUCA.
GeneTreeiENSGT00510000047863.
HOVERGENiHBG056032.
InParanoidiQ17QI1.
KOiK20300.
OMAiFYETPAN.
OrthoDBiEOG091G0RVD.
TreeFamiTF323681.

Enzyme and pathway databases

ReactomeiR-BTA-204005. COPII (Coat Protein 2) Mediated Vesicle Transport.

Gene expression databases

BgeeiENSBTAG00000047214.

Family and domain databases

InterProiIPR011012. Longin-like_dom.
IPR007233. TRAPPC.
[Graphical view]
PANTHERiPTHR23249. PTHR23249. 1 hit.
PfamiPF04099. Sybindin. 1 hit.
[Graphical view]
SMARTiSM01399. Sybindin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiTPPC1_BOVIN
AccessioniPrimary (citable) accession number: Q17QI1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: July 25, 2006
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.