Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q17865 (YTE4_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein C09G1.4
Gene names
ORF Names:C09G1.4
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length545 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain.

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 545545Uncharacterized protein C09G1.4
PRO_0000065171

Regions

Domain458 – 54083PDZ

Sequences

Sequence LengthMass (Da)Tools
Q17865 [UniParc].

Last modified September 22, 2009. Version 3.
Checksum: BE7A3B2253DF8A22

FASTA54560,171
        10         20         30         40         50         60 
MSSGNRQAPM PPPKPRNLGR GQFYQQGGYL TPQDSDTDSG ISADCDQGSP RAAAGFGGTG 

        70         80         90        100        110        120 
FNGTVNGQQV NSQRRIPDLP PGAYQNYRSH SSADYLTPNS ARKIASYSTT PRRLPLQPQQ 

       130        140        150        160        170        180 
QAPATATKAK YRVRFADEVD SGASTSSGTS STHISPRNDP QEMLMNSAVG APQITSTFQQ 

       190        200        210        220        230        240 
PASYMQNSSD AQYKMNKIEY PPVSRTPPVA CSSRTGTLQR TPNRRLPISS TPQPQPTYAD 

       250        260        270        280        290        300 
QMQSLPEPPP YTIAMQRLRS VEQQPQESFR DAFIRKSVND TLQRRYRQRS SSLPRGNKSY 

       310        320        330        340        350        360 
YEGIDIYDAQ PPIRPLPQQQ TSLMTVANQL PGSLDNLHIN NLNMRRRKLP TAPLMGSSCQ 

       370        380        390        400        410        420 
LHLDNSDELT AYRALQFQMM QDELQRQQPP PQSFERPTLL RRTNMPQQQS FNIPHITTTG 

       430        440        450        460        470        480 
PPPPAMGLSV PVQYDQGEYG TQSVRAQLVA LDQRGFRRVL VEKMMPGPFG FYIATGVVAG 

       490        500        510        520        530        540 
QRAGIFISRV SLPSLSPMLT VGDEIIYVDE EYVKGRSLEY VQSVIAGKTS VTITLLPAVG 


QPAIC 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z50176 Genomic DNA. Translation: CAA90541.2.
PIRT19139.
RefSeqNP_510621.2. NM_078220.3.
UniGeneCel.9067.

3D structure databases

ProteinModelPortalQ17865.
SMRQ17865. Positions 457-540.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-25627N.
IntActQ17865. 41 interactions.
MINTMINT-1064024.
STRING6239.C09G1.4.

Proteomic databases

PaxDbQ17865.
PRIDEQ17865.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaC09G1.4; C09G1.4; C09G1.4.
GeneID181679.
KEGGcel:CELE_C09G1.4.
UCSCC09G1.4. c. elegans.

Organism-specific databases

CTD181679.
WormBaseC09G1.4; CE43135; WBGene00007486.

Phylogenomic databases

eggNOGNOG266423.
HOGENOMHOG000020781.
OMAEMLMNSA.
OrthoDBEOG7HMS15.

Family and domain databases

Gene3D2.30.42.10. 1 hit.
InterProIPR001478. PDZ.
[Graphical view]
SMARTSM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMSSF50156. SSF50156. 1 hit.
PROSITEPS50106. PDZ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYTE4_CAEEL
AccessionPrimary (citable) accession number: Q17865
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: September 22, 2009
Last modified: April 16, 2014
This is version 87 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

SIMILARITY comments

Index of protein domains and families

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase