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Q17865

- YTE4_CAEEL

UniProt

Q17865 - YTE4_CAEEL

Protein

Uncharacterized protein C09G1.4

Gene

C09G1.4

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 3 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized protein C09G1.4
    Gene namesi
    ORF Names:C09G1.4
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome X

    Organism-specific databases

    WormBaseiC09G1.4; CE43135; WBGene00007486.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 545545Uncharacterized protein C09G1.4PRO_0000065171Add
    BLAST

    Proteomic databases

    PaxDbiQ17865.
    PRIDEiQ17865.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    alp-1G5EFL53EBI-317562,EBI-316352
    CELE_F57C9.4H2KYD44EBI-317562,EBI-326852
    gei-18Q7K7J05EBI-317562,EBI-2315822
    rimb-1Q9N4156EBI-317562,EBI-6538150
    sorb-1O624825EBI-317562,EBI-325337
    T04C9.1Q8MPT26EBI-317562,EBI-2315635
    uso-1G5EGG04EBI-317562,EBI-311986

    Protein-protein interaction databases

    DIPiDIP-25627N.
    IntActiQ17865. 41 interactions.
    MINTiMINT-1064024.
    STRINGi6239.C09G1.4.

    Structurei

    3D structure databases

    ProteinModelPortaliQ17865.
    SMRiQ17865. Positions 457-540.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini458 – 54083PDZPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 PDZ (DHR) domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG266423.
    HOGENOMiHOG000020781.
    OMAiEMLMNSA.
    OrthoDBiEOG7HMS15.

    Family and domain databases

    Gene3Di2.30.42.10. 1 hit.
    InterProiIPR001478. PDZ.
    [Graphical view]
    SMARTiSM00228. PDZ. 1 hit.
    [Graphical view]
    SUPFAMiSSF50156. SSF50156. 1 hit.
    PROSITEiPS50106. PDZ. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q17865-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSSGNRQAPM PPPKPRNLGR GQFYQQGGYL TPQDSDTDSG ISADCDQGSP    50
    RAAAGFGGTG FNGTVNGQQV NSQRRIPDLP PGAYQNYRSH SSADYLTPNS 100
    ARKIASYSTT PRRLPLQPQQ QAPATATKAK YRVRFADEVD SGASTSSGTS 150
    STHISPRNDP QEMLMNSAVG APQITSTFQQ PASYMQNSSD AQYKMNKIEY 200
    PPVSRTPPVA CSSRTGTLQR TPNRRLPISS TPQPQPTYAD QMQSLPEPPP 250
    YTIAMQRLRS VEQQPQESFR DAFIRKSVND TLQRRYRQRS SSLPRGNKSY 300
    YEGIDIYDAQ PPIRPLPQQQ TSLMTVANQL PGSLDNLHIN NLNMRRRKLP 350
    TAPLMGSSCQ LHLDNSDELT AYRALQFQMM QDELQRQQPP PQSFERPTLL 400
    RRTNMPQQQS FNIPHITTTG PPPPAMGLSV PVQYDQGEYG TQSVRAQLVA 450
    LDQRGFRRVL VEKMMPGPFG FYIATGVVAG QRAGIFISRV SLPSLSPMLT 500
    VGDEIIYVDE EYVKGRSLEY VQSVIAGKTS VTITLLPAVG QPAIC 545
    Length:545
    Mass (Da):60,171
    Last modified:September 22, 2009 - v3
    Checksum:iBE7A3B2253DF8A22
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50176 Genomic DNA. Translation: CAA90541.2.
    PIRiT19139.
    RefSeqiNP_510621.2. NM_078220.3.
    UniGeneiCel.9067.

    Genome annotation databases

    EnsemblMetazoaiC09G1.4; C09G1.4; WBGene00007486.
    GeneIDi181679.
    KEGGicel:CELE_C09G1.4.
    UCSCiC09G1.4. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50176 Genomic DNA. Translation: CAA90541.2 .
    PIRi T19139.
    RefSeqi NP_510621.2. NM_078220.3.
    UniGenei Cel.9067.

    3D structure databases

    ProteinModelPortali Q17865.
    SMRi Q17865. Positions 457-540.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-25627N.
    IntActi Q17865. 41 interactions.
    MINTi MINT-1064024.
    STRINGi 6239.C09G1.4.

    Proteomic databases

    PaxDbi Q17865.
    PRIDEi Q17865.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai C09G1.4 ; C09G1.4 ; WBGene00007486 .
    GeneIDi 181679.
    KEGGi cel:CELE_C09G1.4.
    UCSCi C09G1.4. c. elegans.

    Organism-specific databases

    CTDi 181679.
    WormBasei C09G1.4 ; CE43135 ; WBGene00007486 .

    Phylogenomic databases

    eggNOGi NOG266423.
    HOGENOMi HOG000020781.
    OMAi EMLMNSA.
    OrthoDBi EOG7HMS15.

    Family and domain databases

    Gene3Di 2.30.42.10. 1 hit.
    InterProi IPR001478. PDZ.
    [Graphical view ]
    SMARTi SM00228. PDZ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50156. SSF50156. 1 hit.
    PROSITEi PS50106. PDZ. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiYTE4_CAEEL
    AccessioniPrimary (citable) accession number: Q17865
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 90 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3