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Protein
Submitted name:

SWI/SNF nucleosome remodeling complex component

Gene

swsn-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SWI/SNF nucleosome remodeling complex componentImported
Gene namesi
Name:swsn-9Imported
ORF Names:C01H6.7Imported, CELE_C01H6.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC01H6.7a; CE05190; WBGene00007256; swsn-9.

PTM / Processingi

Proteomic databases

EPDiQ17581.
PaxDbiQ17581.
PeptideAtlasiQ17581.

Expressioni

Gene expression databases

BgeeiWBGene00007256.
ExpressionAtlasiQ17581. baseline and differential.

Interactioni

Protein-protein interaction databases

DIPiDIP-25642N.
IntActiQ17581. 2 interactors.
MINTiMINT-1123143.
STRINGi6239.C01H6.7a.2.

Structurei

3D structure databases

ProteinModelPortaliQ17581.
SMRiQ17581.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini172 – 234BromoInterPro annotationAdd BLAST63

Keywords - Domaini

BromodomainPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1828. Eukaryota.
ENOG410XRRI. LUCA.
GeneTreeiENSGT00530000063939.
HOGENOMiHOG000280704.
InParanoidiQ17581.
KOiK11723.
OMAiGDIVSTY.
OrthoDBiEOG091G06S4.
PhylomeDBiQ17581.

Family and domain databases

Gene3Di1.20.920.10. 1 hit.
InterProiView protein in InterPro
IPR001487. Bromodomain.
IPR021900. DUF3512.
PfamiView protein in Pfam
PF00439. Bromodomain. 1 hit.
PF12024. DUF3512. 1 hit.
PRINTSiPR00503. BROMODOMAIN.
SMARTiView protein in SMART
SM00297. BROMO. 1 hit.
SUPFAMiSSF47370. SSF47370. 1 hit.
PROSITEiView protein in PROSITE
PS50014. BROMODOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q17581-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPEGESRRSM VGIPPTRRAR GGNTPSTATP VVPRTSARAA KRVKKEEPEE
60 70 80 90 100
EEDYKNNNSD PEKSEEDESE ESGDEMTTPS RKTPGGGAGG RKKKRAPLTD
110 120 130 140 150
YHLKKKKILA RKAARDAEKE KEVEPEVQEE VPKEPTPPPP RKAPSFSSYL
160 170 180 190 200
PIQLMQDHIL RKLVEKDPEQ YFAFPVTPSM APDYRDIIKT PMDLQTIREN
210 220 230 240 250
IEDGKYASLP AMKEDCELIV SNAFQYNQPN TVFYLAAKRL SNLIAYYFGE
260 270 280 290 300
QYLRFLFHSL PMANKIPFEI VGIRPLAPVP KERTMNKRKA VVKDGMTSED
310 320 330 340 350
CLQVADPKVR ERLSAKLPEA NNPKNKKMGK LGFLSEKDGT VVLNVVAGDS
360 370 380 390 400
EDGKLENNAP RRVTIGDIVG PLEEGTPGMI QMADHRLFSQ APVNYLNYGP
410 420 430 440 450
YSSFAPMYDS TWATMTKEDT DLFLRTYGDK SNASDVMSMR RFVGDCPEFS
460 470 480 490 500
EIIGSLLDTL TDGEHSKTMK ELENAGKEVK EEVDNDEYKN ETVLSLIDDV
510 520 530 540 550
SSISNLGIET GFLNDIRQQV LVPAVESNIE NNIPEFMNEV NHMNVQQQLN
560 570 580 590 600
HSGQKVKDLA HIQEHRLVQQ PPPMIMSVQG AGQIEQKLAE NLQQHLAHQM
610 620 630
TTHAAPEAFV NDTMIHDAIG VDMDDGDLFS EFFVTQ
Length:636
Mass (Da):71,340
Last modified:November 1, 1996 - v1
Checksum:i02A5B089B8DCD663
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAA95779.1.
PIRiT18845.
RefSeqiNP_492041.1. NM_059640.6.
UniGeneiCel.17216.

Genome annotation databases

EnsemblMetazoaiC01H6.7a.1; C01H6.7a.1; WBGene00007256.
C01H6.7a.2; C01H6.7a.2; WBGene00007256.
GeneIDi172461.
KEGGicel:CELE_C01H6.7.
UCSCiC01H6.7. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ17581_CAEEL
AccessioniPrimary (citable) accession number: Q17581
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported