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Q17526 (Q17526_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 91. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein TSP-11 EMBL CCD62259.1
Gene names
Name:tsp-11 EMBL CCD62259.1 WormBase B0563.2
ORF Names:CELE_B0563.2 EMBL CCD62259.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD62259.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix SAAS SAAS008952
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q17526 [UniParc].

Last modified February 8, 2011. Version 5.
Checksum: 8D54C2ED2036548B

FASTA28732,228
        10         20         30         40         50         60 
MNFRNQSTMP LSCTARALKF SLFIFNLVFL LCGLICLGIG LWLVLDKYAI DNLAFATAKV 

        70         80         90        100        110        120 
QGYDQDAGLR DLATKPTAVR QFGYLLFVGG FIVIVVAFLG CCGAAKEWRP LLCCYSSCLM 

       130        140        150        160        170        180 
LILAIQIAAT IYAFLHSHMF ENDFRDILHS SLKMYNGTDN MKVSNNPQDG LLVKTAWDKI 

       190        200        210        220        230        240 
MIEKSCCGVD SKIGEFNNSG WYQLNHGRYQ FPPACCPPDE HGRLRPYCNT IMRHSHGCYA 

       250        260        270        280 
KIAESFEEVT SHFKIVSWTV VLFALIQVVG IVVGFWLCDS ITSEDEF

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2 EMBL CCD62259.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FO080238 Genomic DNA. Translation: CCD62259.1.
RefSeqNP_509546.4. NM_077145.4.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING6239.B0563.2.

Proteomic databases

PaxDbQ17526.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaB0563.2; B0563.2; B0563.2.
GeneID192064.
KEGGcel:CELE_B0563.2.
UCSCB0563.2. c. elegans.

Organism-specific databases

CTD192064.
WormBaseB0563.2; CE45545; WBGene00006637; tsp-11.

Phylogenomic databases

eggNOGNOG319748.
GeneTreeENSGT00700000105517.
HOGENOMHOG000015924.
InParanoidQ17526.
OMAFENDFRD.

Family and domain databases

InterProIPR000301. Tetraspanin.
IPR018499. Tetraspanin/Peripherin.
IPR008952. Tetraspanin_EC2.
[Graphical view]
PfamPF00335. Tetraspannin. 1 hit.
[Graphical view]
PIRSFPIRSF002419. Tetraspanin. 1 hit.
PRINTSPR00259. TMFOUR.
SUPFAMSSF48652. Tetraspanin. 1 hit.
ProtoNetSearch...

Other

NextBio951438.

Entry information

Entry nameQ17526_CAEEL
AccessionPrimary (citable) accession number: Q17526
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: February 8, 2011
Last modified: April 3, 2013
This is version 91 of the entry and version 5 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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