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Protein
Submitted name:

Uncharacterized protein

Gene

valv-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • zinc ion binding Source: WormBase

GO - Biological processi

  • digestive system process Source: WormBase
  • innate immune response Source: WormBase
  • oviposition Source: WormBase

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:valv-1Imported
ORF Names:B0496.7Imported, CELE_B0496.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiB0496.7; CE06719; WBGene00015216; valv-1.

PTM / Processingi

Proteomic databases

EPDiQ17522.
PaxDbiQ17522.
PeptideAtlasiQ17522.

Expressioni

Gene expression databases

BgeeiWBGene00015216.

Interactioni

Protein-protein interaction databases

DIPiDIP-25531N.
IntActiQ17522. 2 interactors.
MINTiMINT-1042881.
STRINGi6239.B0496.7.

Structurei

3D structure databases

ProteinModelPortaliQ17522.
SMRiQ17522.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 64LIM zinc-bindingInterPro annotationAdd BLAST63

Keywords - Domaini

LIM domainPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410ITI6. Eukaryota.
ENOG4111U5J. LUCA.
GeneTreeiENSGT00550000074548.
HOGENOMiHOG000264233.
InParanoidiQ17522.
OMAiYCNNPCY.
OrthoDBiEOG091G11RX.
PhylomeDBiQ17522.

Family and domain databases

InterProiView protein in InterPro
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 1 hit.
SMARTiView protein in SMART
SM00132. LIM. 1 hit.
PROSITEiView protein in PROSITE
PS50023. LIM_DOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q17522-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNCPNCQKP VYFAERVSSL GKDWHRPCLK CANKACGKTL SAGSHSEHEG
60 70 80
KPYCNRCYGA LFGPKGYGHG GTESHTFLQG TTGN
Length:84
Mass (Da):9,076
Last modified:November 1, 1996 - v1
Checksum:iB422EF887A0CA2CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CCD62051.1.
PIRiT29254.
RefSeqiNP_501187.1. NM_068786.5.
UniGeneiCel.13643.

Genome annotation databases

EnsemblMetazoaiB0496.7; B0496.7; WBGene00015216.
GeneIDi182010.
KEGGicel:CELE_B0496.7.
UCSCiB0496.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CCD62051.1.
PIRiT29254.
RefSeqiNP_501187.1. NM_068786.5.
UniGeneiCel.13643.

3D structure databases

ProteinModelPortaliQ17522.
SMRiQ17522.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25531N.
IntActiQ17522. 2 interactors.
MINTiMINT-1042881.
STRINGi6239.B0496.7.

Proteomic databases

EPDiQ17522.
PaxDbiQ17522.
PeptideAtlasiQ17522.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiB0496.7; B0496.7; WBGene00015216.
GeneIDi182010.
KEGGicel:CELE_B0496.7.
UCSCiB0496.7. c. elegans.

Organism-specific databases

CTDi182010.
WormBaseiB0496.7; CE06719; WBGene00015216; valv-1.

Phylogenomic databases

eggNOGiENOG410ITI6. Eukaryota.
ENOG4111U5J. LUCA.
GeneTreeiENSGT00550000074548.
HOGENOMiHOG000264233.
InParanoidiQ17522.
OMAiYCNNPCY.
OrthoDBiEOG091G11RX.
PhylomeDBiQ17522.

Gene expression databases

BgeeiWBGene00015216.

Family and domain databases

InterProiView protein in InterPro
IPR001781. Znf_LIM.
PfamiView protein in Pfam
PF00412. LIM. 1 hit.
SMARTiView protein in SMART
SM00132. LIM. 1 hit.
PROSITEiView protein in PROSITE
PS50023. LIM_DOMAIN_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ17522_CAEEL
AccessioniPrimary (citable) accession number: Q17522
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 7, 2017
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.