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Q16DL2

- Q16DL2_ROSDO

UniProt

Q16DL2 - Q16DL2_ROSDO

Protein
Submitted name:

Ubiquinone biosynthesis protein UbiB

Gene

ubiB

Organism
Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (25 Jul 2006)
      Previous versions | rss
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    Functioni

    Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.SAAS annotation

    Pathwayi

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. kinase activity Source: UniProtKB-KW
    3. oxidoreductase activity Source: UniProtKB-KW

    GO - Biological processi

    1. ubiquinone biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    KinaseSAAS annotation, OxidoreductaseImported, Transferase

    Keywords - Biological processi

    Ubiquinone biosynthesisSAAS annotation

    Keywords - Ligandi

    ATP-bindingSAAS annotation, Nucleotide-binding, UbiquinoneImported

    Enzyme and pathway databases

    BioCyciRDEN375451:GJIZ-190-MONOMER.
    UniPathwayiUPA00232.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ubiquinone biosynthesis protein UbiBImported (EC:1.14.13.-Imported)
    Gene namesi
    Name:ubiBImported
    Ordered Locus Names:RD1_0202Imported
    OrganismiRoseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)Imported
    Taxonomic identifieri375451 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseobacter
    ProteomesiUP000007029: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Cell inner membraneSAAS annotation, Cell membrane, Membrane

    Interactioni

    Protein-protein interaction databases

    STRINGi375451.RD1_0202.

    Structurei

    3D structure databases

    ProteinModelPortaliQ16DL2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains protein kinase domain.SAAS annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    eggNOGiCOG0661.
    HOGENOMiHOG000264438.
    KOiK03688.
    OMAiRLDPDFK.
    OrthoDBiEOG61P6SS.

    Family and domain databases

    InterProiIPR011009. Kinase-like_dom.
    IPR010232. UbiB.
    IPR004147. UbiB_dom.
    [Graphical view]
    PfamiPF03109. ABC1. 1 hit.
    [Graphical view]
    SUPFAMiSSF56112. SSF56112. 2 hits.
    TIGRFAMsiTIGR01982. UbiB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q16DL2-1 [UniParc]FASTAAdd to Basket

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    MRGPHNIWRL IRTGATLERT GAMKVVLDAF EAPRAVRFVA RALGIPFKFL    50
    GYYGDPSMPP ATRALTALGP AYIKFGQILS TRPDVVGDEL AVQLRVLQDK 100
    LPPFSVAVAK AEVSKELGVP VDQVFSEFSE PVAAASIAQV HRARIASTGE 150
    DVAVKVLRPG IERAFNKDVD AFYLAARMVE LFAPGARRLR PMDVIEHFDG 200
    VVQGELDLRL ESSAASEFAA TTKDDEGFQL PEIKWDLSAR RVMTLGWAAG 250
    VPLGDNDAID AAGHNRVELG NRVLQLFLNH ALRDGYFHGD MHQGNLKVAP 300
    NGDIVAYDFG IMGHIDEYTR RVYAEILFGF IRRDYKRVAE VHFEAGYVPA 350
    DKDVDEFARA LRAVGEPIFG MDASKISMGR LLNYLFEVTE RFGMETRTEL 400
    ILLQRTMVVV EGVARSLNPQ INIWEVASPV VSNYISQSIG PRATLKDLAK 450
    TARVLARFGP RLPVMVENAL IRTSNPQPVR RENSWGKWIV GGLILGVTIG 500
    VSGSLTLIAV DLMFF 515
    Length:515
    Mass (Da):56,829
    Last modified:July 25, 2006 - v1
    Checksum:i43125B57773CD26C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000362 Genomic DNA. Translation: ABG29931.1.
    RefSeqiYP_680617.1. NC_008209.1.

    Genome annotation databases

    EnsemblBacteriaiABG29931; ABG29931; RD1_0202.
    GeneIDi4198191.
    KEGGirde:RD1_0202.
    PATRICi23358581. VBIRosDen86677_0195.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000362 Genomic DNA. Translation: ABG29931.1 .
    RefSeqi YP_680617.1. NC_008209.1.

    3D structure databases

    ProteinModelPortali Q16DL2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 375451.RD1_0202.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG29931 ; ABG29931 ; RD1_0202 .
    GeneIDi 4198191.
    KEGGi rde:RD1_0202.
    PATRICi 23358581. VBIRosDen86677_0195.

    Phylogenomic databases

    eggNOGi COG0661.
    HOGENOMi HOG000264438.
    KOi K03688.
    OMAi RLDPDFK.
    OrthoDBi EOG61P6SS.

    Enzyme and pathway databases

    UniPathwayi UPA00232 .
    BioCyci RDEN375451:GJIZ-190-MONOMER.

    Family and domain databases

    InterProi IPR011009. Kinase-like_dom.
    IPR010232. UbiB.
    IPR004147. UbiB_dom.
    [Graphical view ]
    Pfami PF03109. ABC1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56112. SSF56112. 2 hits.
    TIGRFAMsi TIGR01982. UbiB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33942 / OCh 114Imported.

    Entry informationi

    Entry nameiQ16DL2_ROSDO
    AccessioniPrimary (citable) accession number: Q16DL2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 25, 2006
    Last sequence update: July 25, 2006
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3