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Q16CT4 (Q16CT4_ROSDO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length285 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q16CT4 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 58B56EF6FF1AC17F

FASTA28530,944
        10         20         30         40         50         60 
MRDFSKDLSA LALNTASLGH NLDGYGAGWS TEAVIDACGA RGFGGIVFWR REIGTSAQQI 

        70         80         90        100        110        120 
GDRVRAAGLE VAGLCRSPFL TGPLVPGDDA AIMDDFHASI DMAAGLGTEV LTVVTGGIDP 

       130        140        150        160        170        180 
GTKGPLESQK RVADRVARAA EYAAARNVKL ALEPLNPMFG GNRSCIFTVR DALHMCDWIG 

       190        200        210        220        230        240 
LDNVGLAIDV YHVWWDSTLT ETMPRATGKV LGYHVCDWLA ETRDTLLDRG MMGDGVADLK 

       250        260        270        280 
ALRQLVEETG YKGYCEVEVF SAEDWWKRDP NEVLDVIAQR FRSLC

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References

[1]"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism."
Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W.
J. Bacteriol. 189:683-690(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33942 / OCh 114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000362 Genomic DNA. Translation: ABG30209.1.
RefSeqYP_680895.1. NC_008209.1.

3D structure databases

ProteinModelPortalQ16CT4.
ModBaseSearch...

Protein-protein interaction databases

STRING375451.RD1_0502.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG30209; ABG30209; RD1_0502.
GeneID4197813.
KEGGrde:RD1_0502.
PATRIC23359175. VBIRosDen86677_0491.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1082.
HOGENOMHOG000246528.
OMAFWRREIG.
ProtClustDBCLSK514952.

Enzyme and pathway databases

BioCycRDEN375451:GJIZ-470-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ16CT4_ROSDO
AccessionPrimary (citable) accession number: Q16CT4
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: May 1, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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