Q16CD0 (Q16CD0_ROSDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Mannonate dehydratase HAMAP MF_00106
EC=4.2.1.8 HAMAP MF_00106

Alternative name(s):
D-mannonate hydrolase HAMAP MF_00106

Gene names

Name:	uxuA HAMAP MF_00106
Ordered Locus Names:	RD1_0665

Organism

Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) [Complete proteome] [HAMAP] EMBL ABG30363.1

Taxonomic identifier

375451 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Roseobacter

Protein attributes

Sequence length	395 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O. HAMAP MF_00106
Pathway	Carbohydrate metabolism; pentose and glucuronate interconversion. HAMAP MF_00106
Sequence similarities	Belongs to the mannonate dehydratase family. HAMAP MF_00106

Ontologies

Keywords
Molecular function	Lyase HAMAP MF_00106 EMBL ABG30363.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glucuronate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	mannonate dehydratase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q16CD0 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: F1B3E6646F5B0BEE	FASTA	395	43,677
	10 20 30 40 50 60 MKQCWRWFGP ADKIALPDLH QVGVQGIVSA LHDILPGALW TPEAIRQRQD MLHQQGFDWT 70 80 90 100 110 120 VVESLPVSES IKTQSPQMAD HLLAYKKSLR NLAAAGISTI CYNFMPILDW TRTELRAKQP 130 140 150 160 170 180 HGGTAMLFCF LDFAVFDLHI LQRDGATADY SQELQEMAAQ RFADLTDAQR VALQNNIVAG 190 200 210 220 230 240 LPGSNDKWTT DDVRAHLATY QDISPTQLRQ NLIDFLSEVC PVAEELGLRL CCHPDDPPFS 250 260 270 280 290 300 LLGLPRIMSS TDDYAHILDA VPSPANGATL CTGSLGVAEG FDPVEFVSRL GDKIHFVHLR 310 320 330 340 350 360 NTKRLPGSDR ARPDFFEAAH LEGDTDMVAT IKALLAEEQR RKAAGRADWE IPMRPDHGQE 370 380 390 LLSDLGGDSM PGYPLIGRMR GLAELRGIMA AFDAA

References

[1]

"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism." Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'Huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W. J. Bacteriol. 189:683-690(2007) [PubMed: 17098896] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000362 Genomic DNA. Translation: ABG30363.1.
RefSeq	YP_681049.1. NC_008209.1.
3D structure databases
ProteinModelPortal	Q16CD0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q16CD0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4198040.
GenomeReviews	Gene locus RD1_0665 in contig CP000362_GR.
KEGG	rde:RD1_0665.
NMPDR	fig|375451.6.peg.627.
PATRIC	23359495. VBIRosDen86677_0651.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1312.
HOGENOM	HBG585927.
OMA	VHEEIKT.
PhylomeDB	Q16CD0.
ProtClustDB	PRK03906.
Enzyme and pathway databases
BioCyc	RDEN375451:RD1_0665-MONOMER.
Family and domain databases
HAMAP	MF_00106. UxuA. [Tree]
InterPro	IPR004628. Man_deHydtase. IPR013022. Xyl_isomerase-like_TIM-brl. [Graphical view]
Gene3D	G3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit.
KO	K01686.
Pfam	PF03786. UxuA. 1 hit. [Graphical view]
PIRSF	PIRSF016049. Man_dehyd. 1 hit.
SUPFAM	SSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
TIGRFAMs	TIGR00695. UxuA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q16CD0_ROSDO

Accession

Primary (citable) accession number: Q16CD0

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)