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Reviewed, UniProtKB/Swiss-Prot Q16864 (VATF_HUMAN)

Last modified November 25, 2008. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    V-type proton ATPase subunit F
      Short name=V-ATPase subunit F
Alternative name(s):
    Vacuolar proton pump subunit F
    V-ATPase 14 kDa subunit
Gene names
Name: ATP6V1F
Synonyms: ATP6S14, VATF
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length119 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Subunit structure

V-ATPase is an heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c', c'' and d).

Sequence similarities

Belongs to the V-ATPase F subunit family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 119119V-type proton ATPase subunit F
PRO_0000144799

Experimental info

Sequence conflict81I → T in BAA08392. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q16864-1 [UniParc].

Last modified February 20, 2007. Version 2.
Checksum: 9FE5A8BD249A85FA

FASTA11913,370
        10         20         30         40         50         60 
MAGRGKLIAV IGDEDTVTGF LLGGIGELNK NRHPNFLVVE KDTTINEIED TFRQFLNRDD 

        70         80         90        100        110 
IGIILINQYI AEMVRHALDA HQQSIPAVLE IPSKEHPYDA AKDSILRRAR GMFTAEDLR 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, sequencing and expression of a novel cDNA encoding human vacuolar ATPase (14-kDa subunit)."
Fujiwara T., Kawai A., Shimizu F., Hirano H., Okuno S., Takeda S., Ozaki K., Shimada Y., Nagata M., Watanabe T., Takaichi A., Nakamura Y., Shin S.
DNA Res. 2:107-111(1995) [PubMed: 8581736] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Fetal brain.
[2]"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)."
Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.

Cross-references

Sequence databases

D49400 mRNA. Translation: BAA08392.1.
CR456896 mRNA. Translation: CAG33177.1.
BC104230 mRNA. Translation: AAI04231.1.
BC104231 mRNA. Translation: AAI04232.1.
BC107854 mRNA. Translation: AAI07855.1.
PIRJC4193.
RefSeqNP_004222.2.
UniGeneHs.78089

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ16864.

Proteomic databases

PeptideAtlasQ16864.

Genome annotation databases

EnsemblENSG00000128524. Homo sapiens. [Contig view]
GeneID9296.
KEGGhsa:9296.

Organism-specific databases

HGNCHGNC:16832. ATP6V1F.
HPACAB009529.
MIM607160. gene.
PharmGKBPA38421.
GenAtlasSearch...
GeneCardsSearch...

Phylogenomic databases

HOGENOMQ16864.
HOVERGENQ16864.

Gene expression databases

CleanExHS_ATP6V1F.
GermOnlineENSG00000128524. Homo sapiens.

Family and domain databases

InterProIPR008218. ATPase_V1/A1_F.
IPR005772. ATPase_V1_F_euk.
[Graphical view]
PANTHERPTHR13861. ATPase_V1_F_euk. 1 hit.
PfamPF01990. ATP-synt_F. 1 hit.
[Graphical view]
PIRSFPIRSF015945. ATPase_V1_F_euk. 1 hit.
TIGRFAMsTIGR01101. V_ATP_synt_F. 1 hit.
ProtoNetSearch...

Other Resources

NextBio34831.
SOURCESearch...

Entry information

Entry nameVATF_HUMAN
AccessionPrimary (citable) accession number: Q16864
Secondary accession number(s): Q6IBA8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 20, 2007
Last modified: November 25, 2008
This is version 69 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 7

Human chromosome 7: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

UniProtKB secondary accession numbers

Index of UniProtKB secondary accession numbers

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents