Q167I4 (Q167I4_ROSDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Fumarate hydratase, class II EMBL ABG31859.1
EC=4.2.1.2 EMBL ABG31859.1

Gene names

Name:	fumC EMBL ABG31859.1
Ordered Locus Names:	RD1_2273

Organism

Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) [Complete proteome] [HAMAP] EMBL ABG31859.1

Taxonomic identifier

375451 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Roseobacter

Protein attributes

Sequence length	463 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Lyase EMBL ABG31859.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fumarate metabolic process Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular component	tricarboxylic acid cycle enzyme complex Inferred from electronic annotation. Source: InterPro
Molecular function	fumarate hydratase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q167I4 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 1F5773B26F87DC03	FASTA	463	49,404
	10 20 30 40 50 60 MTQTRTETDS FGPLEVPADK YWGAQTQRSI MNFPIGWEKQ PVAIVRALGV IKQACAQANV 70 80 90 100 110 120 ELGKLDAARG EAIIQAASEV VAGKFDDNFP LVVWQTGSGT QSNMNANEVI ANRAIEIMGG 130 140 150 160 170 180 VIGTKDPVHP NDHCNMGQSS NDTFPTAMHI STAMTARDVL LPGLEKLHAA LEVKIAQFDG 190 200 210 220 230 240 IIKIGRTHTQ DATPLTLSQE FSGYAHQVAM GIQRVKDALG RIYELAQGGT AVGTGLNTPV 250 260 270 280 290 300 GWDVMVAKNM ADITGLPFVT APNKFEALAA HDAMVEMSGA LKVVAASLFK IANDIRLLGS 310 320 330 340 350 360 GPRCGLGELV LPENEPGSSI MPGKVNPTQC EALTQVCAHV FGNDAAVGFA GSQGHFELNV 370 380 390 400 410 420 YKPMMSYNVL QSMQLLGDAA STFTDNLVDG LTADADRIER LMRESLMLVT ALAPEIGYDN 430 440 450 460 ATKVAKTAHK NGTTLKEEAI ALGFVDAETF ERVVRPENMI GPK

References

[1]

"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism." Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'Huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W. J. Bacteriol. 189:683-690(2007) [PubMed: 17098896] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000362 Genomic DNA. Translation: ABG31859.1.
RefSeq	YP_682545.1. NC_008209.1.
3D structure databases
ProteinModelPortal	Q167I4.
SMR	Q167I4. Positions 5-460.
ModBase	Search...
Protein-protein interaction databases
STRING	Q167I4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4196467.
GenomeReviews	Gene locus RD1_2273 in contig CP000362_GR.
KEGG	rde:RD1_2273.
NMPDR	fig|375451.6.peg.2121.
PATRIC	23362585. VBIRosDen86677_2175.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0114.
HOGENOM	HBG284369.
OMA	RIEKDTM.
PhylomeDB	Q167I4.
ProtClustDB	PRK00485.
Enzyme and pathway databases
BioCyc	RDEN375451:RD1_2273-MONOMER.
Family and domain databases
HAMAP	MF_00743. FumaraseC. [Tree]
InterPro	IPR005677. Fum_hydII. IPR018951. Fumarase_C_C. IPR000362. Fumarate_lyase. IPR020557. Fumarate_lyase_CS. IPR008948. L-Aspartase-like. IPR024083. L-Aspartase-like_N. IPR022761. Lyase1_N. [Graphical view]
Gene3D	G3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KO	K01679.
Pfam	PF10415. FumaraseC_C. 1 hit. PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00149. FUMRATELYASE.
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR00979. FumC_II. 1 hit.
PROSITE	PS00163. FUMARATE_LYASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q167I4_ROSDO

Accession

Primary (citable) accession number: Q167I4

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)