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Q165E4 (GLGA_ROSDO) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:RD1_2873
OrganismRoseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) [Complete proteome] [HAMAP]
Taxonomic identifier375451 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseobacter

Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 479479Glycogen synthase HAMAP-Rule MF_00484
PRO_1000190081

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q165E4 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 8E8A5436683E696C

FASTA47951,027
        10         20         30         40         50         60 
MKVLFVASEC APFVKTGGLA DVIGAVPKAL APLGVEARVM LPLYPALRVL SEGGKTVWSS 

        70         80         90        100        110        120 
DNLHGGAARL LDVRAEGLDL LLLDAPHLFD RGGNIYLDAD GTDWPDNPLR FGALSWVAAD 

       130        140        150        160        170        180 
IAANGAAGWQ PEIVHAHDWQ AGLVPAYLHQ MDAPKPPCVL TIHNIAFQGL FSPDLMAPLG 

       190        200        210        220        230        240 
LDAALYTQDG MEFYGNLGFL KAGLAFADKI TTVSPTYARE IMQPEFGMGL EGLLRARARD 

       250        260        270        280        290        300 
VSGILNGIDT DVWNPETDPA LPKSYSLKGL KAKQQSRQAV LERFGLTPPD NAPLFCVISR 

       310        320        330        340        350        360 
LTTQKGVDVL LDVVPDLVAR GAGLAVLGSG DRDLEAAFVA AAHRFPGAVG VIIGYDEDLS 

       370        380        390        400        410        420 
HLMQGGSDAI LIPSRFEPCG LTQLYGLRYG TIPVVARTGG LADTIIDANE AALAATCATG 

       430        440        450        460        470 
VQFAPVTPDA LSHAIDRCCD LFAERKTWSG MMRCAMRHPV GWETSSKAYL EVYDRLLGG 

« Hide

References

[1]"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism."
Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'Huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W.
J. Bacteriol. 189:683-690(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33942 / OCh 114.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000362 Genomic DNA. Translation: ABG32399.1.
RefSeqYP_683085.1. NC_008209.1.

3D structure databases

ProteinModelPortalQ165E4.
SMRQ165E4. Positions 1-477.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING375451.RD1_2873.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG32399; ABG32399; RD1_2873.
GeneID4196031.
KEGGrde:RD1_2873.
PATRIC23363737. VBIRosDen86677_2741.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAKAGITEC.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycRDEN375451:GJIZ-2705-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_ROSDO
AccessionPrimary (citable) accession number: Q165E4
Entry history
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: July 25, 2006
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways