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Protein

Glycogen synthase

Gene

glgA

Organism
Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciRDEN375451:GJIZ-2705-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:RD1_2873
OrganismiRoseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)
Taxonomic identifieri375451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseobacter
ProteomesiUP000007029 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 479479Glycogen synthasePRO_1000190081Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi375451.RD1_2873.

Structurei

3D structure databases

ProteinModelPortaliQ165E4.
SMRiQ165E4. Positions 1-477.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q165E4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVLFVASEC APFVKTGGLA DVIGAVPKAL APLGVEARVM LPLYPALRVL
60 70 80 90 100
SEGGKTVWSS DNLHGGAARL LDVRAEGLDL LLLDAPHLFD RGGNIYLDAD
110 120 130 140 150
GTDWPDNPLR FGALSWVAAD IAANGAAGWQ PEIVHAHDWQ AGLVPAYLHQ
160 170 180 190 200
MDAPKPPCVL TIHNIAFQGL FSPDLMAPLG LDAALYTQDG MEFYGNLGFL
210 220 230 240 250
KAGLAFADKI TTVSPTYARE IMQPEFGMGL EGLLRARARD VSGILNGIDT
260 270 280 290 300
DVWNPETDPA LPKSYSLKGL KAKQQSRQAV LERFGLTPPD NAPLFCVISR
310 320 330 340 350
LTTQKGVDVL LDVVPDLVAR GAGLAVLGSG DRDLEAAFVA AAHRFPGAVG
360 370 380 390 400
VIIGYDEDLS HLMQGGSDAI LIPSRFEPCG LTQLYGLRYG TIPVVARTGG
410 420 430 440 450
LADTIIDANE AALAATCATG VQFAPVTPDA LSHAIDRCCD LFAERKTWSG
460 470
MMRCAMRHPV GWETSSKAYL EVYDRLLGG
Length:479
Mass (Da):51,027
Last modified:July 25, 2006 - v1
Checksum:i8E8A5436683E696C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000362 Genomic DNA. Translation: ABG32399.1.
RefSeqiWP_011569015.1. NC_008209.1.
YP_683085.1. NC_008209.1.

Genome annotation databases

EnsemblBacteriaiABG32399; ABG32399; RD1_2873.
GeneIDi4196031.
KEGGirde:RD1_2873.
PATRICi23363737. VBIRosDen86677_2741.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000362 Genomic DNA. Translation: ABG32399.1.
RefSeqiWP_011569015.1. NC_008209.1.
YP_683085.1. NC_008209.1.

3D structure databases

ProteinModelPortaliQ165E4.
SMRiQ165E4. Positions 1-477.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi375451.RD1_2873.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG32399; ABG32399; RD1_2873.
GeneIDi4196031.
KEGGirde:RD1_2873.
PATRICi23363737. VBIRosDen86677_2741.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPFWRPDI.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciRDEN375451:GJIZ-2705-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33942 / OCh 114.

Entry informationi

Entry nameiGLGA_ROSDO
AccessioniPrimary (citable) accession number: Q165E4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: July 25, 2006
Last modified: April 1, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.