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Protein
Submitted name:

Conserved domain protein

Gene

RD1_2927

Organism
Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRDEN375451:GJIZ-2755-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Conserved domain proteinImported
Gene namesi
Ordered Locus Names:RD1_2927Imported
OrganismiRoseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans)Imported
Taxonomic identifieri375451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRoseobacter
ProteomesiUP000007029 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi375451.RD1_2927.

Structurei

3D structure databases

ProteinModelPortaliQ164Z4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3899.
OMAiICESANQ.
OrthoDBiEOG61CKW9.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
3.30.70.1230. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR025874. DZR.
IPR000261. EPS15_homology.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR011990. TPR-like_helical_dom.
IPR013105. TPR_2.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF12773. DZR. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
PF07719. TPR_2. 1 hit.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50031. EH. 1 hit.
PS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q164Z4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIECLNCDT ANRAGRRFCS SCGAALPVAC ASCGFSNEPE DAFCGGCGVA
60 70 80 90 100
ISHSKSAPVP APRPAPADPA KPYAFEGDRR QLTVMFCDLV GSTVISEQLD
110 120 130 140 150
PEEMTGLLTA YRVACAEVVE QFGGFIGNFM GDGLLIYFGY PQAHEDDPQR
160 170 180 190 200
AIRAGLAIIS AVEALNKDFS APDVCLNVRI GVNTGLVVAA DIGAGEQREK
210 220 230 240 250
MAIVGDTPNI AARLQSLAEP GTVVIGRRTH RLVEGLFICE PLGAQTLKGI
260 270 280 290 300
SDPIEVFRVC ESTEARSSFE AKLQRGLTPM AGRKEELSLL VNRWDQAKGG
310 320 330 340 350
DGQIVLVSGE PGVGKSRVLQ HFQTQVLAQN CTAISFVCSS YRQDTPFHPL
360 370 380 390 400
IDFFERTLQA EADNTPSAML DKLDAYLSGL GFDVAEYGSL LAAMLSLPAA
410 420 430 440 450
GRYNAPVLTL EDQKKQTLKA LVSIIQALSD QTPLLILVED LQWADHSTRE
460 470 480 490 500
FLGLLVEHVR TSRILVVPAF RADFDPPWSK QPHLTMLRLR HLSRPESIEL
510 520 530 540 550
IEGVTGGRPL PDEVLDHIWS KTDGVPLFIE ELTKLVLEMD LLKLVNGRYE
560 570 580 590 600
LTGPLGATAI PDSLQDSLMA RLDHLGSAKE AAQLASVLGR TFGHALLLAV
610 620 630 640 650
TQKSEDALDG ALTRLVDAEL LYRRGLAPEV VYEFKHALIK DAAYQGLLHS
660 670 680 690 700
KRRQLHLDIA EILEQRFPQV SERSPEVLSY HYKAAGDVEK AIPFSFHAGD
710 720 730 740 750
AAAARYASTE ASAHYQSALD MAKSVPSDEA SAKLQIRAIL KLANVASSRD
760 770 780 790 800
QFERNLGNLG MARALAEKID HKIRLCQIQY WTGRTYYVLG RFALAADLAR
810 820 830 840 850
QALELAEKLG DSDERMKTGP VNLLARVHCL LGEPVAAINY ASQSVRQMHD
860 870 880 890 900
VGDHIEEAAV AGVLAFALAQ HGEYQKAMDA ANHGVELAHE LGHLPTEAAC
910 920 930 940 950
LMFRGLVNGW FGRLSDATPD FEQSLYICEQ SGDVFRKYLT LGWRGEACLV
960 970 980 990 1000
AGEIVAARNH LEQCLELGST LGTSFHRGAF EAFLAKALLS KGDTNTALRL
1010 1020 1030 1040 1050
SEAAVVTATE SGETWPRSIA LRVATEVQIA SSAPDISAAQ ASIASAIQIQ
1060 1070 1080 1090 1100
TERQCKCDLA WSNLVNGHVL AAKGDHQDAA EAYAVTQRMF EDLNIDRGVE
1110
LAKTALVALK GVGATAH
Length:1,117
Mass (Da):120,912
Last modified:July 25, 2006 - v1
Checksum:i05CF84A2C1B44BA5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000362 Genomic DNA. Translation: ABG32449.1.
RefSeqiWP_011569065.1. NC_008209.1.
YP_683135.1. NC_008209.1.

Genome annotation databases

EnsemblBacteriaiABG32449; ABG32449; RD1_2927.
KEGGirde:RD1_2927.
PATRICi23363845. VBIRosDen86677_2795.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000362 Genomic DNA. Translation: ABG32449.1.
RefSeqiWP_011569065.1. NC_008209.1.
YP_683135.1. NC_008209.1.

3D structure databases

ProteinModelPortaliQ164Z4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi375451.RD1_2927.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG32449; ABG32449; RD1_2927.
KEGGirde:RD1_2927.
PATRICi23363845. VBIRosDen86677_2795.

Phylogenomic databases

eggNOGiCOG3899.
OMAiICESANQ.
OrthoDBiEOG61CKW9.

Enzyme and pathway databases

BioCyciRDEN375451:GJIZ-2755-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
3.30.70.1230. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR025874. DZR.
IPR000261. EPS15_homology.
IPR029787. Nucleotide_cyclase.
IPR027417. P-loop_NTPase.
IPR011990. TPR-like_helical_dom.
IPR013105. TPR_2.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF12773. DZR. 1 hit.
PF00211. Guanylate_cyc. 1 hit.
PF07719. TPR_2. 1 hit.
[Graphical view]
SMARTiSM00044. CYCc. 1 hit.
SM00028. TPR. 3 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF55073. SSF55073. 1 hit.
PROSITEiPS50031. EH. 1 hit.
PS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33942 / OCh 114Imported.

Entry informationi

Entry nameiQ164Z4_ROSDO
AccessioniPrimary (citable) accession number: Q164Z4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: June 24, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.