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Q164B0 (Q164B0_ROSDO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA-3-methyladenine glycosylase II, putative EMBL ABG32683.1
EC=3.2.2.21 EMBL ABG32683.1
Gene names
Ordered Locus Names:RD1_3176
OrganismRoseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) [Complete proteome] [HAMAP] EMBL ABG32683.1
Taxonomic identifier375451 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Roseobacter

Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q164B0 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: A349A52E3FAA2968

FASTA20922,805
        10         20         30         40         50         60 
MTGRLIETDG DVREGAQWLS QTCPRLAYAF DQTGPLPLRR RPDGFAQLLS AIVSQQVSVA 

        70         80         90        100        110        120 
SARAIWAKLE AAGMVDPATV RAACEDDLRA LGLSRQKIRY AHALVAADID YAGLRSLPDG 

       130        140        150        160        170        180 
EVIKTLVAVP GIGNWTAEIY AMFSLGRADV FAPGDLALQE AARSLYALDA RPKESALREM 

       190        200 
AVAWSPWRSV AARLLFAYYR VVKQREGIT

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References

[1]"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism."
Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'Huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W.
J. Bacteriol. 189:683-690(2007) [PubMed: 17098896] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000362 Genomic DNA. Translation: ABG32683.1.
RefSeqYP_683369.1. NC_008209.1.

3D structure databases

ProteinModelPortalQ164B0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ164B0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4198606.
GenomeReviewsGene locus RD1_3176 in contig CP000362_GR.
KEGGrde:RD1_3176.
NMPDRfig|375451.6.peg.2951.
PATRIC23364325. VBIRosDen86677_3033.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0122.
HOGENOMHBG544181.
OMAKGIGNWT.
ProtClustDBCLSK933770.

Enzyme and pathway databases

BioCycRDEN375451:RD1_3176-MONOMER.

Family and domain databases

InterProIPR011257. DNA_glycosylase.
IPR003265. HhH-GPD_domain.
IPR023170. HTH_base_excis_C.
[Graphical view]
Gene3DG3DSA:1.10.340.30. DNA_glycosylase. 1 hit.
G3DSA:1.10.1670.10. HTH_base_excis_C. 1 hit.
KOK01247.
PfamPF00730. HhH-GPD. 1 hit.
[Graphical view]
SMARTSM00478. ENDO3c. 1 hit.
[Graphical view]
SUPFAMSSF48150. DNA_glycsylse. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ164B0_ROSDO
AccessionPrimary (citable) accession number: Q164B0
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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