Q15ZZ7 (Q15ZZ7_PSEA6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Chromosomal replication initiator protein DnaA HAMAP MF_00377

Gene names

Name:	dnaA HAMAP MF_00377
Ordered Locus Names:	Patl_0001

Organism

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG38534.1

Taxonomic identifier

342610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids By similarity. HAMAP MF_00377
Subcellular location	Cytoplasm By similarity HAMAP MF_00377.
Sequence similarities	Belongs to the DnaA family. HAMAP MF_00377

Ontologies

Keywords
Biological process	DNA replication HAMAP MF_00377
Cellular component	Cytoplasm HAMAP MF_00377
Ligand	ATP-binding HAMAP MF_00377 DNA-binding HAMAP MF_00377 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA-dependent DNA replication initiation Inferred from electronic annotation. Source: HAMAP regulation of DNA replication Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP DNA replication origin binding Inferred from electronic annotation. Source: HAMAP nucleoside-triphosphatase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	179 – 186	8	ATP By similarity HAMAP MF_00377

Sequences

	Sequence		Length	Mass (Da)
	Q15ZZ7 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 33C4FFADAD3EFB62	FASTA	474	53,813
	10 20 30 40 50 60 MSLWNRCLER LQQDLPTQQF SMWIRPLVAN EEAAAVTLFA PNRFVLDWVR DKYIAQIEAL 70 80 90 100 110 120 FAEFCANDAV PQLRIEVKSA ASVQQSYSQN PAPAIHQSSA VENSIKSLQK HQAARSNVNV 130 140 150 160 170 180 QADNSPPNVK IAASHKSNIN FNYKFDNFVE GKSNQLARAA SKQVSDNPGK AYNPLFIYGG 190 200 210 220 230 240 TGLGKTHLLH AVGNGIIDNK KDATVVYMHS ERFVQDMVKA LQNNAIEEFK RYYRSVDALL 250 260 270 280 290 300 IDDIQFFANK ERSQEEFFHT FNALLEGNQQ IILTSDRYPK EIDGVEDRLK SRFGWGLTIA 310 320 330 340 350 360 IEPPELETRV AILMRKALEN KIVLPDEVAF FIAKRLRSNV RELEGALNRV IANANFTGRP 370 380 390 400 410 420 ITIDFVREAL RDLLALQEKL VTIDNIQKTV AEYYKIKMAD ILSKRRSRSV ARPRQMAMAL 430 440 450 460 470 SKELTNHSLP EIGDAFGGRD HTTVLHACRK IVQLREESHD IKEDYQNLIR TLSS

References

[1]

"Complete sequence of Pseudoalteromonas atlantica T6c." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000388 Genomic DNA. Translation: ABG38534.1.
RefSeq	YP_659588.1. NC_008228.1.
3D structure databases
ProteinModelPortal	Q15ZZ7.
SMR	Q15ZZ7. Positions 1-79, 381-474.
ModBase	Search...
Protein-protein interaction databases
STRING	Q15ZZ7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4171826.
GenomeReviews	Gene locus Patl_0001 in contig CP000388_GR.
KEGG	pat:Patl_0001.
PATRIC	23044768. VBIPseAtl25434_0001.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0593.
HOGENOM	HBG695666.
OMA	DEVAFLI.
PhylomeDB	Q15ZZ7.
Enzyme and pathway databases
BioCyc	PATL342610:PATL_0001-MONOMER.
Family and domain databases
HAMAP	MF_00377. DnaA_bact. [Tree]
InterPro	IPR003593. ATPase_AAA+_core. IPR001957. Chromosome_initiator_DnaA. IPR020591. Chromosome_initiator_DnaA-like. IPR018312. Chromosome_initiator_DnaA_CS. IPR013159. DnaA_C. IPR013317. DnaA_Hda. IPR010921. Trp_repressor/repl_initiator. [Graphical view]
Gene3D	G3DSA:1.10.1750.10. DnaA_C. 1 hit.
KO	K02313.
Pfam	PF00308. Bac_DnaA. 1 hit. PF08299. Bac_DnaA_C. 1 hit. [Graphical view]
PRINTS	PR00051. DNAA.
SMART	SM00382. AAA. 1 hit. SM00760. Bac_DnaA_C. 1 hit. [Graphical view]
SUPFAM	SSF48295. Trp_repress_rep. 1 hit.
TIGRFAMs	TIGR00362. DnaA. 1 hit.
PROSITE	PS01008. DNAA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q15ZZ7_PSEA6

Accession

Primary (citable) accession number: Q15ZZ7

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)