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Q15XM1 (Q15XM1_PSEA6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ig-like, group 2 EMBL ABG39367.1
Gene names
Ordered Locus Names:Patl_0839
OrganismPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG39367.1
Taxonomic identifier342610 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length983 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABG39367.1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL ABG39367.1
Chain30 – 983954 Potential EMBL ABG39367.1
PRO_5000125171

Sequences

Sequence LengthMass (Da)Tools
Q15XM1 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 3D674970866E0D46

FASTA983109,335
        10         20         30         40         50         60 
MKWFQPSKAS LAIAFGLASA GYVHTSYGQP AVVSVDLSKQ LYVGDTTALD RNKFFNIHSS 

        70         80         90        100        110        120 
PGEPGAAEQD MLYIKNELNA QYGRIFWGPM ALNGSADYPD TEQAMLDGEQ SIINAKAGAF 

       130        140        150        160        170        180 
YEFGTNRMVA TEHPRSVLAP GNDPVEGARW AADYFEYYFE DERRPLFYEP MNEPFVHASD 

       190        200        210        220        230        240 
FVDGPWDPVA NEAVQRHMAS WFAEIGKTFD QRGLNTNVIG FSSAWPSFEL SDFSHWQSRQ 

       250        260        270        280        290        300 
KMFMDLAGDH MDGFSFHLYD GVNVEGQDNF RSGSNAEAII DMIEAYSHIK WGEVKDHAVT 

       310        320        330        340        350        360 
EYGGIIDGYP LEYSAAKSAQ ELRSYNHILF SLLEREDRIL TSTPFITGIS KWFYDANNFN 

       370        380        390        400        410        420 
PYSATVLRPD PNKIISNKVN GYLPTEKAYF YKLWSDVKGN RVAVDTLDPD LAVQAFNYGS 

       430        440        450        460        470        480 
TLYLALNNYE DSSKDVDLRF IYQGNSVSQV RAKRLDVPYD QAANYTDEIL SSAPSSITMQ 

       490        500        510        520        530        540 
GHETVVLEYE FAQPISPDGI VRKSSYYAQT YLQPIVENTE LAFTFNDIDV GQSSMGFADV 

       550        560        570        580        590        600 
YQGVEFDQAV VDAIQTNEIN RLTSTMRSFD RQLTNIINKH SDAWRESADF ARLIQRAERS 

       610        620        630        640        650        660 
ATTAKALQYH YAMHGYNASE RTAILKMGVG RKHDKSKQPV VLVNGYRVEV PNDWRGYDQT 

       670        680        690        700        710        720 
SREDFFGVIE IPVPAKFLKA NTNIELIFPD TQGHVSSLIL EVDTQEPLQT VAVTGLEMQK 

       730        740        750        760        770        780 
PYVAIKKDRP YRLFANVMPQ TATNKYLLWQ SSDESIATVE DGLVTPIAPG FVDISAMSED 

       790        800        810        820        830        840 
GEFSASTSVE VKDELTVRNT IVITNDVSSM EPTNSITLDI DYSTSIDRDV AFELIGPQGN 

       850        860        870        880        890        900 
WLGLSRVTVP AGEGTTQITL SFEETLAPGT GYKIIAALRE VGGDWRTSVD GHTITGVEIA 

       910        920        930        940        950        960 
SPDAAPVPVD NLLGANGDFE QGTLGDWQRV FGSTGDVDIS QEAAYNGSYG IKFDTANGRA 

       970        980 
GISLGENVLP TALMKANKRL WRQ

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References

[1]"Complete sequence of Pseudoalteromonas atlantica T6c."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000388 Genomic DNA. Translation: ABG39367.1.
RefSeqYP_660421.1. NC_008228.1.

3D structure databases

ProteinModelPortalQ15XM1.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ15XM1.

Protein family/group databases

CAZyGH86. Glycoside Hydrolase Family 86.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4173980.
GenomeReviewsGene locus Patl_0839 in contig CP000388_GR.
KEGGpat:Patl_0839.
NMPDRfig|342610.3.peg.4080.
PATRIC23046554. VBIPseAtl25434_0880.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG78012.

Enzyme and pathway databases

BioCycPATL342610:PATL_0839-MONOMER.

Family and domain databases

InterProIPR003343. Big_2.
IPR017853. Glycoside_hydrolase_SF.
IPR008964. Invasin/intimin_cell_adhesion.
[Graphical view]
PfamPF02368. Big_2. 1 hit.
[Graphical view]
SMARTSM00635. BID_2. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF49373. Invasin_intimin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ15XM1_PSEA6
AccessionPrimary (citable) accession number: Q15XM1
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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