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Q15X88 (Q15X88_PSEA6) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.2.14 EMBL ABG39500.1
Gene names
Ordered Locus Names:Patl_0974 EMBL ABG39500.1
OrganismPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG39500.1
Taxonomic identifier342610 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABG39500.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_function2-dehydro-3-deoxy-phosphogluconate aldolase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q15X88 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 4C80E2F6A23BA982

FASTA21522,132
        10         20         30         40         50         60 
MTKNWKVSSQ DVFSQGPVVP VLVIKDVKHA VPLAKALIAG GIRVLEVTLR TEAALDVIKA 

        70         80         90        100        110        120 
IATEVPDAII GAGTVTNAKQ LAEVEAAGAM FAISPGMTSD LLDAGNKGGI ALIPGISSIS 

       130        140        150        160        170        180 
ELMRGIDFGY THFKFFPAEA SGGVKAIKAI GGPFPDIAFC PTGGISPTNY LEYLSLPNVR 

       190        200        210 
CAGGSWLAPD DAVEAGDWDR ITELAKQAVA GAAGI 

« Hide

References

[1]"Complete sequence of Pseudoalteromonas atlantica T6c."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000388 Genomic DNA. Translation: ABG39500.1.
RefSeqYP_660554.1. NC_008228.1.

3D structure databases

ProteinModelPortalQ15X88.
SMRQ15X88. Positions 3-212.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342610.Patl_0974.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG39500; ABG39500; Patl_0974.
GeneID4173823.
KEGGpat:Patl_0974.
PATRIC23046846. VBIPseAtl25434_1026.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0800.
HOGENOMHOG000233114.
KOK01625.
OMAKFFPAEY.
OrthoDBEOG67DPKT.
ProtClustDBPRK05718.

Enzyme and pathway databases

BioCycPATL342610:GHGT-989-MONOMER.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR000887. Aldlse_KDPG_KHG.
IPR013785. Aldolase_TIM.
[Graphical view]
PfamPF01081. Aldolase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01182. eda. 1 hit.
PROSITEPS00159. ALDOLASE_KDPG_KHG_1. 1 hit.
PS00160. ALDOLASE_KDPG_KHG_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ15X88_PSEA6
AccessionPrimary (citable) accession number: Q15X88
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)