Q15X21 (RS21_PSEA6) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S21

Gene names

Name:	rpsU
Ordered Locus Names:	Patl_1041

Organism

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP]

Taxonomic identifier

342610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	71 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S21P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 71	71	30S ribosomal protein S21 HAMAP MF_00358		PRO_0000266733

Sequences

	Sequence		Length	Mass (Da)
	Q15X21 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: E725AC685C91A964	FASTA	71	8,701
	10 20 30 40 50 60 MPIVKVRENE PFDVALRRFK RSCEKAGVLS EVRRREFFEK PTWERKRKKA AAKKRLLKKL 70 SRENARRIRL Y

References

[1]

"Complete sequence of Pseudoalteromonas atlantica T6c." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000388 Genomic DNA. Translation: ABG39567.1.
RefSeq	YP_660621.1. NC_008228.1.
3D structure databases
ProteinModelPortal	Q15X21.
SMR	Q15X21. Positions 4-54.
ModBase	Search...
Protein-protein interaction databases
STRING	Q15X21.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4172827.
GenomeReviews	Gene locus Patl_1041 in contig CP000388_GR.
KEGG	pat:Patl_1041.
NMPDR	fig|342610.3.peg.3997.
PATRIC	23046994. VBIPseAtl25434_1095.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0828.
HOGENOM	HBG708268.
OMA	FFEKPTW.
PhylomeDB	Q15X21.
ProtClustDB	PRK00270.
Enzyme and pathway databases
BioCyc	PATL342610:PATL_1041-MONOMER.
Family and domain databases
HAMAP	MF_00358. Ribosomal_S21. [Tree]
InterPro	IPR001911. Ribosomal_S21. IPR018278. Ribosomal_S21_CS. [Graphical view]
KO	K02970.
Pfam	PF01165. Ribosomal_S21. 1 hit. [Graphical view]
PRINTS	PR00976. RIBOSOMALS21.
ProDom	PD005521. Ribosomal_S21. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00030. S21p. 1 hit.
PROSITE	PS01181. RIBOSOMAL_S21. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS21_PSEA6

Accession

Primary (citable) accession number: Q15X21

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	July 25, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program