Q15WP0 (Q15WP0_PSEA6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL ABG39698.1

Gene names

Ordered Locus Names:

Patl_1172

Organism

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG39698.1

Taxonomic identifier

342610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	281 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q15WP0 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 9F5307363563E42A	FASTA	281	32,669
	10 20 30 40 50 60 MPVTGLNAMT VDVEDFFHVS AFESVITPDQ WKDYQPRVDK NTRTLLEMFA KHNVKSTFFV 70 80 90 100 110 120 LGWVAERYPE LIKEIHAQGH EIASHGYAHR RATEQTREQF TADVTRSKEH LEDLLGEALT 130 140 150 160 170 180 GYRAPSFSIG YNNEWAFEVL AELGFKYSSS TYPVKHDLYG TPDWPRFAYT RKEGIIEIPI 190 200 210 220 230 240 PTHKVMGRQT PIGGGGYFRL YPYTLTKSLI TGYLKKEKQP YSFYFHPWEI DADQPRMTNA 250 260 270 280 PLKSRFRHYV NLNKTQGKLE RLLNDFSWDT MKSVYNIEST S

References

[1]

"Complete sequence of Pseudoalteromonas atlantica T6c." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000388 Genomic DNA. Translation: ABG39698.1.
RefSeq	YP_660752.1. NC_008228.1.
3D structure databases
ProteinModelPortal	Q15WP0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q15WP0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4172578.
GenomeReviews	Gene locus Patl_1172 in contig CP000388_GR.
KEGG	pat:Patl_1172.
NMPDR	fig|342610.3.peg.2583.
PATRIC	23047284. VBIPseAtl25434_1239.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG612640.
OMA	VEDYFQV.
ProtClustDB	CLSK2315495.
Enzyme and pathway databases
BioCyc	PATL342610:PATL_1172-MONOMER.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q15WP0_PSEA6

Accession

Primary (citable) accession number: Q15WP0

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)