Q15VB4 (Q15VB4_PSEA6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate phosphodiesterase EMBL ABG40174.1

Gene names

Ordered Locus Names:

Patl_1652

Organism

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG40174.1

Taxonomic identifier

342610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	406 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q15VB4 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 1C2F9F64D0985931	FASTA	406	46,526
	10 20 30 40 50 60 MNFYAARQPI LHADKTLFAY ELLFRDSLEN TFPNINEDEA TAKMVAGLQF NLGLDSLLPD 70 80 90 100 110 120 TLAFINFTHN SLLDGYPLML PKEKIVVEIL ETVKPGKKLL NACIDLKKKG YIVALDDYVH 130 140 150 160 170 180 QGVWLHFFPY IDIIKIDYQD TSHEQILKII EAIKPFPKVK LLAEKIETHQ EYLQALEYGC 190 200 210 220 230 240 CYFQGYFFSK PEIIKNTALT PSQMSIAKLM GEMAKEDPKI EIITQAFESD VSLSFKLLRY 250 260 270 280 290 300 AQSPIFKRTK QIETIKQAIV VLGQTELRRF VSLLFTAQFS EGKPAELTVM SLSRARYCEL 310 320 330 340 350 360 LTEYSNQRDG VASAFLVGLL SLLDAMLDAD IADLMEKLPI SQNIKDSIVL RQGEQAKYLM 370 380 390 400 LSEFFEEGRW SDVNRLCENL DVNFDDAFSM FQQSQLWAKE RLQALK

References

[1]

"Complete sequence of Pseudoalteromonas atlantica T6c." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000388 Genomic DNA. Translation: ABG40174.1.
RefSeq	YP_661228.1. NC_008228.1.
3D structure databases
ProteinModelPortal	Q15VB4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q15VB4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4174081.
GenomeReviews	Gene locus Patl_1652 in contig CP000388_GR.
KEGG	pat:Patl_1652.
NMPDR	fig|342610.3.peg.2726.
PATRIC	23048334. VBIPseAtl25434_1757.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3434.
HOGENOM	HBG537479.
OMA	RQPIFNR.
ProtClustDB	CLSK757235.
Enzyme and pathway databases
BioCyc	PATL342610:PATL_1652-MONOMER.
Family and domain databases
InterPro	IPR014408. dGMP_Pdiesterase_EAL/HD-GYP. IPR001633. Diguanylate_PEstase_EAL_dom. IPR013976. HDOD. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit. G3DSA:1.10.3150.10. HDOD. 1 hit.
KO	K07181.
Pfam	PF00563. EAL. 1 hit. PF08668. HDOD. 1 hit. [Graphical view]
PIRSF	PIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMART	SM00052. EAL. 1 hit. [Graphical view]
SUPFAM	SSF141868. SSF141868. 1 hit.
PROSITE	PS50883. EAL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q15VB4_PSEA6

Accession

Primary (citable) accession number: Q15VB4

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)