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Protein

Exodeoxyribonuclease 7 large subunit

Gene

xseA

Organism
Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionExonuclease, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciPATL342610:G1G6R-3235-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 large subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII large subunitUniRule annotation
Short name:
Exonuclease VII large subunitUniRule annotation
Gene namesi
Name:xseAUniRule annotation
Ordered Locus Names:Patl_3121
OrganismiPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Taxonomic identifieri342610 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas
Proteomesi
  • UP000001981 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002736741 – 444Exodeoxyribonuclease 7 large subunitAdd BLAST444

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotation

Protein-protein interaction databases

STRINGi342610.Patl_3121

Structurei

3D structure databases

SMRiQ15R61
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the XseA family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DVS Bacteria
COG1570 LUCA
HOGENOMiHOG000229265
KOiK03601
OMAiNARRRWP
OrthoDBiPOG091H02EK

Family and domain databases

CDDicd04489 ExoVII_LU_OBF, 1 hit
HAMAPiMF_00378 Exonuc_7_L, 1 hit
InterProiView protein in InterPro
IPR003753 Exonuc_VII_L
IPR020579 Exonuc_VII_lsu_C
IPR025824 OB-fold_nuc-bd_dom
PANTHERiPTHR30008 PTHR30008, 1 hit
PfamiView protein in Pfam
PF02601 Exonuc_VII_L, 1 hit
PF13742 tRNA_anti_2, 1 hit
TIGRFAMsiTIGR00237 xseA, 1 hit

Sequencei

Sequence statusi: Complete.

Q15R61-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFSASPANRN IFTVSKLNHL ARSVLESEIG QVWLSAEISN FVAASSGHWY
60 70 80 90 100
FTLKDNRAQI KSAMFKGANR KVMTRPKEGD KVLVQANLSI YEPRGDYQLI
110 120 130 140 150
VEHLEPEGEG QLKRQFEALK LALSAQGLFA NENKQPLPDS ISRIGVVTSA
160 170 180 190 200
TGAALHDILT VLKRRNPAVE VIIYPTQVQG ANASRQICRS IEIANQRNEV
210 220 230 240 250
DILIVGRGGG SLEDLWCFNE ENVAWAIHYS VLPIVSAVGH EVDITIADFV
260 270 280 290 300
ADLRAPTPSA AAELVSQSQI EMLSALTAKR DRLYKNTRTL LKELHYQQQS
310 320 330 340 350
LTQELNTYHP KNQLRQHMQR VDNQLTAITH NMTTRLMRAK QTCDSRISKL
360 370 380 390 400
SQLSPKALLK EQQNTHNLLS QRLTQAWRRG VEQRHLKLAN ASHLLDTVSP
410 420 430 440
LSTLARGYSI TFKNDKVVKS QKDLAKGDVI TNRFADGETK STVN
Length:444
Mass (Da):49,647
Last modified:July 25, 2006 - v1
Checksum:i6C3767B5322FCABF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000388 Genomic DNA Translation: ABG41627.1
RefSeqiWP_011575865.1, NC_008228.1

Genome annotation databases

EnsemblBacteriaiABG41627; ABG41627; Patl_3121
KEGGipat:Patl_3121

Similar proteinsi

Entry informationi

Entry nameiEX7L_PSEA6
AccessioniPrimary (citable) accession number: Q15R61
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: July 25, 2006
Last modified: June 20, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

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