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Q15Q11 (Q15Q11_PSEA6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length586 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4646 Potential EMBL ABG42027.1
Chain47 – 586540 Potential EMBL ABG42027.1
PRO_5000125766

Sequences

Sequence LengthMass (Da)Tools
Q15Q11 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 3551C027D87094A6

FASTA58664,201
        10         20         30         40         50         60 
MSRVSTNKKR NQQAKQNVAP TALQWRYLLV IGVIMLVFVG LSARAVYIQV IDPDLLIKQG 

        70         80         90        100        110        120 
DNRTLRTQNM PVHRGLITDR NGQNLAVSVP VRAIWADPKT IVENGSLNDK RRWQALADVL 

       130        140        150        160        170        180 
GQDYTKLVSR VKNPKKRFVY IQRQVSPAMA DYVDQLSISG VYLRDESRRY YPTGEVSAQL 

       190        200        210        220        230        240 
IGFTNVDDQG IEGIEKLYNE WLKGAPGSRK IRRDGKGRQV EILEQEAGEE PKDIQLTIDQ 

       250        260        270        280        290        300 
RIQAFAYKEL KKAVQYYKAT SASAVVVDVQ TGEILAMVNN PSYNPNNRSG VSGHRIRNRA 

       310        320        330        340        350        360 
ITDAFEPGSS IKPIAVLSAL EFGSVEMDSV IDTSPGWMRV GGSMVRDSRN YGELDLTGII 

       370        380        390        400        410        420 
RKSSNMGTSK LALSVPKQFL IDQYYNMGLM SDTGSNLIGE SSGIFHDRSR WSEFELSTLS 

       430        440        450        460        470        480 
FGYGLSVTTA QLARMYSVLG SGGIKRPLSV IKSEQKAPEE RVLSEDIAHE VLTMMESVVN 

       490        500        510        520        530        540 
EGGSGTKARV PGYRVAGKTG TSRKAVAGGY GEEYVSIFAG VAPVSDPQLA VVVLINEPRG 

       550        560        570        580 
DLYYAGDTAA PVFSKIMSNS LQMLNVPPDD KSVSSLASIT GASHAG 

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References

[1]"Complete sequence of Pseudoalteromonas atlantica T6c."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000388 Genomic DNA. Translation: ABG42027.1.
RefSeqYP_663081.1. NC_008228.1.

3D structure databases

ProteinModelPortalQ15Q11.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342610.Patl_3525.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG42027; ABG42027; Patl_3525.
GeneID4175304.
KEGGpat:Patl_3525.
PATRIC23052386. VBIPseAtl25434_3744.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0768.
HOGENOMHOG000049554.
KOK03587.
OMAQMARSYT.
OrthoDBEOG6N0HHV.
ProtClustDBCLSK2315853.

Enzyme and pathway databases

BioCycPATL342610:GHGT-3596-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ15Q11_PSEA6
AccessionPrimary (citable) accession number: Q15Q11
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)