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Q15PJ9 (Q15PJ9_PSEA6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, clan GH-D EMBL ABG42189.1
Gene names
Ordered Locus Names:Patl_3687
OrganismPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG42189.1
Taxonomic identifier342610 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length718 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABG42189.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q15PJ9 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: DFA354DE16ED1036

FASTA71880,855
        10         20         30         40         50         60 
MTQHAAQFIA LHGQKSSLVL DVGYETPQII YWRAKLSEQS TGDMMRALRL RQEAPVSPIV 

        70         80         90        100        110        120 
ELDLCITPTS GQGFTGLPGL SLHGGSDQWA ANPKLKKVTQ NNEYSVTLTS IDAARGVEVV 

       130        140        150        160        170        180 
VTIKLDQDTD VLTFDTALNN ITEQTITLDW CAAATIPTPA DFDQIIGFEG HWAGEFQQHS 

       190        200        210        220        230        240 
LDKFFGSYVR ENRRGKTSHD SYPALLLHPK TTNQAQGEAY GFHLGWSGNH KIVAEKMADG 

       250        260        270        280        290        300 
RSYVQMGELL FPGEIVLSKN QSYQTPTLFA SYTDQGLSAL SQQFHQYVRT HIIRQSVHDK 

       310        320        330        340        350        360 
PRPVHYNTWE GIYFNHDVDT LKDLAERAAE MGAERFVLDD GWFIGRNDDT AGLGDWYVDK 

       370        380        390        400        410        420 
AFYPEGLTPV IEHVKAQGLE FGLWFEPEMV NPDSDLYRQH PEWVLGNEVS KQIDCRNQLV 

       430        440        450        460        470        480 
LDLSRPEVFE YLFERLDSLL SEYDISYVKW DMNRDLNHQG NHSGKPGGHN QIHAVYRLLD 

       490        500        510        520        530        540 
KIREAHPQVE VESCASGGGR ADYGVLARTD RVWTSDSNDA LERLKIQNGF SYFLPSELMG 

       550        560        570        580        590        600 
SHVGPRECHI THRTVSMEMR ASVTLFGHMG MEMDLRELTD AEKVELKAMT DLYKQHRALV 

       610        620        630        640        650        660 
HSGDLFRLEL PAYMNGLGIV AKDKSQALFS YSLVACSSAT LPDQYKFAGL DKNSQYKLDI 

       670        680        690        700        710 
IWPIKNTDKW PKSGLFGFVN HLGAVDGQVF SGELLMQLGM QMPLLTPQSS LLFHLTKV

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References

[1]"Complete sequence of Pseudoalteromonas atlantica T6c."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000388 Genomic DNA. Translation: ABG42189.1.
RefSeqYP_663243.1. NC_008228.1.

3D structure databases

ProteinModelPortalQ15PJ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ15PJ9.

Protein family/group databases

CAZyGH36. Glycoside Hydrolase Family 36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4175467.
GenomeReviewsGene locus Patl_3687 in contig CP000388_GR.
KEGGpat:Patl_3687.
NMPDRfig|342610.3.peg.3656.
PATRIC23052740. VBIPseAtl25434_3920.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3345.
HOGENOMHBG299823.
OMAMPQTWTS.
ProtClustDBCLSK771585.

Enzyme and pathway databases

BioCycPATL342610:PATL_3687-MONOMER.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002252. Glyco_hydro_36.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK07407.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PIRSFPIRSF005536. Agal. 1 hit.
PRINTSPR00743. GLHYDRLASE36.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ15PJ9_PSEA6
AccessionPrimary (citable) accession number: Q15PJ9
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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