Q15PF8 (Q15PF8_PSEA6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinofuranosidase EMBL ABG42230.1
EC=3.2.1.55 EMBL ABG42230.1

Gene names

Ordered Locus Names:

Patl_3728

Organism

Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG42230.1

Taxonomic identifier

342610 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	383 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABG42230.1
Molecular function	Glycosidase EMBL ABG42230.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ABG42230.1
	Chain	22 – 383	362	Potential EMBL ABG42230.1		PRO_5000125817

Sequences

	Sequence		Length	Mass (Da)
	Q15PF8 [UniParc]. Last modified July 25, 2006. Version 1. Checksum: 8034DDB80DED6C94	FASTA	383	42,797
	10 20 30 40 50 60 MHTRYLTLLA LSAAMLSGCS EQSSHKEAAS DTLQTTASSN APATHQQKTA KAEHKGLDEY 70 80 90 100 110 120 GSKSLPLVSN IYTADPSAHV FDGKLYIYPS HDYEAGIPQN DNGDHFAMRD YHILSMNEVG 130 140 150 160 170 180 GEVTDHGVAL SVDDVPWAGR QMWAPDAASK NGLYYLYFPL KDQQDIFRIG VATSDSPVGP 190 200 210 220 230 240 FTPEAEPMAG SFSMDPAVFE DDDQQHYLFF GGIWGGQLQR WTKGEYSPQD DYPADDAPAL 250 260 270 280 290 300 MPKAVKLADN MVSMDGEPQD IMILDESGKP IKQGDLERRF FEAAWVHKYQ GNYYLSYSTG 310 320 330 340 350 360 DTHKIVYAMS ENLMGPYTFK GVVLDPVIGW TNHHSIAEFQ GKWYLFYHDS TLSKGQTHLR 370 380 SVKMAELKYN EDGTIVPYQA YYQ

References

[1]

"Complete sequence of Pseudoalteromonas atlantica T6c." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000388 Genomic DNA. Translation: ABG42230.1.
RefSeq	YP_663284.1. NC_008228.1.
3D structure databases
ProteinModelPortal	Q15PF8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q15PF8.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4175508.
GenomeReviews	Gene locus Patl_3728 in contig CP000388_GR.
KEGG	pat:Patl_3728.
NMPDR	fig|342610.3.peg.3717.
PATRIC	23052826. VBIPseAtl25434_3963.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG26186.
HOGENOM	HBG585375.
OMA	NGDWIAV.
ProtClustDB	CLSK813222.
Enzyme and pathway databases
BioCyc	PATL342610:PATL_3728-MONOMER.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01209.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q15PF8_PSEA6

Accession

Primary (citable) accession number: Q15PF8

Entry history

Integrated into UniProtKB/TrEMBL:	July 25, 2006
Last sequence update:	July 25, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)