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Q15NV7 (Q15NV7_PSEA6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Patl_3931 EMBL ABG42431.1
OrganismPseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) [Complete proteome] [HAMAP] EMBL ABG42431.1
Taxonomic identifier342610 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length536 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q15NV7 [UniParc].

Last modified July 25, 2006. Version 1.
Checksum: 1D262552577536AA

FASTA53659,345
        10         20         30         40         50         60 
MAVAEVSLEH LFRVFTMPEG KDSKLAQIEQ HLSDNLADFL SQHVVTKVTS LEQIEQSFAE 

        70         80         90        100        110        120 
FNVPEHPEFV SEHAANLLEK LVANSVNTYS PTFIGHMTSA LPYFHLSLAK LLVGLNQNLV 

       130        140        150        160        170        180 
KIETSKAFTP LERQVLGMMH ELVYAQKSDF YNTYLHNANH ALGAFCSGGT IANVTALWVA 

       190        200        210        220        230        240 
RNKALAADGV FKGVAREGLA AGLAHYGYKK MAILSSRRGH YSLSKSVDIL GLGREQLITL 

       250        260        270        280        290        300 
DCPTQRLSPE KALAFGKEYA EQGNKILSIV GVAGTTETGH VDPLDELADV AQELGCHFHV 

       310        320        330        340        350        360 
DAAWGGATLF SSTHRKILKG IERADSVTID AHKQMYVPMG AGMVLFKDPN DSNAVRHHAN 

       370        380        390        400        410        420 
YILRAGSKDL GATTLEGSRN GMAMMVYASL HIFGRQGYEL LIDQSIEKAK VFARMIQSHP 

       430        440        450        460        470        480 
DFELITHPTL SLLTYRVNPQ EVQQQVKADF SLNVKFNEKL DKLTVYVQKQ QREAGKSFVS 

       490        500        510        520        530 
RTRLQTQTYG DQTMTVFRVV LANPLTTEND LQNILDEQIA IASKSQNWAE LTEKVI 

« Hide

References

[1]"Complete sequence of Pseudoalteromonas atlantica T6c."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Karls A.C., Bartlett D., Higgins B.P., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: T6c / ATCC BAA-1087.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000388 Genomic DNA. Translation: ABG42431.1.
RefSeqYP_663485.1. NC_008228.1.

3D structure databases

ProteinModelPortalQ15NV7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING342610.Patl_3931.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG42431; ABG42431; Patl_3931.
GeneID4175711.
KEGGpat:Patl_3931.
PATRIC23053258. VBIPseAtl25434_4179.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAGMMHNLV.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycPATL342610:GHGT-4003-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ15NV7_PSEA6
AccessionPrimary (citable) accession number: Q15NV7
Entry history
Integrated into UniProtKB/TrEMBL: July 25, 2006
Last sequence update: July 25, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)