ID COJA1_HUMAN Reviewed; 1142 AA. AC Q14993; Q00559; Q05850; Q12885; Q13676; Q14DH1; Q5JUF0; Q5T424; Q9H572; AC Q9NPZ2; Q9NQP2; DT 16-NOV-2001, integrated into UniProtKB/Swiss-Prot. DT 05-JUL-2005, sequence version 3. DT 27-MAR-2024, entry version 197. DE RecName: Full=Collagen alpha-1(XIX) chain; DE AltName: Full=Collagen alpha-1(Y) chain; DE Flags: Precursor; GN Name=COL19A1; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RX PubMed=7775380; DOI=10.1093/oxfordjournals.jbchem.a124700; RA Inoguchi K., Yoshioka H., Khaleduzzaman M., Ninomiya Y.; RT "The mRNA for alpha 1(XIX) collagen chain, a new member of FACITs, contains RT a long unusual 3' untranslated region and displays many unique splicing RT variants."; RL J. Biochem. 117:137-146(1995). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RX PubMed=9344653; DOI=10.1006/geno.1997.4921; RA Khaleduzzaman M., Sumiyoshi H., Ueki Y., Inoguchi K., Ninomiya Y., RA Yoshioka H.; RT "Structure of the human type XIX collagen (COL19A1) gene, which suggests it RT has arisen from an ancestor gene of the FACIT family."; RL Genomics 45:304-312(1997). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=14574404; DOI=10.1038/nature02055; RA Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., RA Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., RA Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., RA Andrews T.D., Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., RA Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., RA Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., RA Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., RA Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., RA Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., RA Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., RA Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., RA French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., RA Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., RA Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., RA Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., RA Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., RA Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., RA Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., RA Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., RA Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., RA Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., RA Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., RA Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., RA Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., RA Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., RA Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., RA Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., RA West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., RA Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., RA Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., RA Rogers J., Beck S.; RT "The DNA sequence and analysis of human chromosome 6."; RL Nature 425:805-811(2003). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [5] RP NUCLEOTIDE SEQUENCE [MRNA] OF 26-624. RC TISSUE=Rhabdomyosarcoma; RX PubMed=1639419; DOI=10.1016/0888-7543(92)90176-s; RA Yoshioka H., Zhang H., Ramirez F., Mattei M.-G., Moradi-Ameli M., RA van der Rest M., Gordon M.K.; RT "Synteny between the loci for a novel FACIT-like collagen locus (D6S228E) RT and alpha 1 (IX) collagen (COL9A1) on 6q12-q14 in humans."; RL Genomics 13:884-886(1992). RN [6] RP NUCLEOTIDE SEQUENCE [MRNA] OF 106-1020. RX PubMed=7916703; DOI=10.1016/0378-1119(93)90126-n; RA Myers J.C., Sun M.J., D'Ippolito J.A., Jabs E.W., Neilson E.G., Dion A.S.; RT "Human cDNA clones transcribed from an unusually high-molecular-weight RNA RT encode a new collagen chain."; RL Gene 123:211-217(1993). RN [7] RP NUCLEOTIDE SEQUENCE [MRNA] OF 738-1142. RC TISSUE=Skin; RX PubMed=8034603; DOI=10.1016/s0021-9258(17)32344-x; RA Myers J.C., Yang H., D'Ippolito J.A., Presente A., Miller M.K., Dion A.S.; RT "The triple-helical region of human type XIX collagen consists of multiple RT collagenous subdomains and exhibits limited sequence homology to alpha RT 1(XVI)."; RL J. Biol. Chem. 269:18549-18557(1994). RN [8] RP FUNCTION, SUBUNIT, TISSUE SPECIFICITY, AND DOMAIN. RX PubMed=12788917; DOI=10.1074/jbc.m304629200; RA Myers J.C., Li D., Amenta P.S., Clark C.C., Nagaswami C., Weisel J.W.; RT "Type XIX collagen purified from human umbilical cord is characterized by RT multiple sharp kinks delineating collagenous subdomains and by RT intermolecular aggregates via globular, disulfide-linked, and heparin- RT binding amino termini."; RL J. Biol. Chem. 278:32047-32057(2003). RN [9] RP VARIANTS [LARGE SCALE ANALYSIS] ASP-361 AND ASN-1019. RX PubMed=16959974; DOI=10.1126/science.1133427; RA Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., RA Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., RA Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V., RA Gazdar A.F., Hartigan J., Wu L., Liu C., Parmigiani G., Park B.H., RA Bachman K.E., Papadopoulos N., Vogelstein B., Kinzler K.W., RA Velculescu V.E.; RT "The consensus coding sequences of human breast and colorectal cancers."; RL Science 314:268-274(2006). CC -!- FUNCTION: May act as a cross-bridge between fibrils and other CC extracellular matrix molecules. Involved in skeletal myogenesis in the CC developing esophagus. May play a role in organization of the CC pericellular matrix or the sphinteric smooth muscle. CC {ECO:0000269|PubMed:12788917}. CC -!- SUBUNIT: Oligomer; disulfide-linked. {ECO:0000269|PubMed:12788917}. CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular CC matrix {ECO:0000250}. CC -!- TISSUE SPECIFICITY: Localized to vascular, neuronal, mesenchymal, and CC some epithelial basement membrane zones in umbilical cord. CC {ECO:0000269|PubMed:12788917}. CC -!- DOMAIN: The numerous interruptions in the triple helix may make this CC molecule either elastic or flexible. {ECO:0000269|PubMed:12788917}. CC -!- PTM: Prolines at the third position of the tripeptide repeating unit CC (G-X-Y) are hydroxylated in some or all of the chains. CC -!- SIMILARITY: Belongs to the fibril-associated collagens with interrupted CC helices (FACIT) family. {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; D38163; BAA07368.1; -; mRNA. DR EMBL; AB004629; BAA23309.1; -; Genomic_DNA. DR EMBL; AL118519; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL133388; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL136445; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL160262; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL359539; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; BC113362; AAI13363.1; -; mRNA. DR EMBL; BC113364; AAI13365.1; -; mRNA. DR EMBL; M63597; AAA58468.1; -; mRNA. DR EMBL; L12347; AAA36358.1; -; mRNA. DR EMBL; U09279; AAA21146.1; -; mRNA. DR EMBL; AH000850; AAA21147.1; -; Genomic_DNA. DR CCDS; CCDS4970.1; -. DR PIR; JX0369; JX0369. DR RefSeq; NP_001849.2; NM_001858.5. DR RefSeq; XP_011533740.1; XM_011535438.2. DR RefSeq; XP_016865744.1; XM_017010255.1. DR AlphaFoldDB; Q14993; -. DR BioGRID; 107705; 1. DR ComplexPortal; CPX-1760; Collagen type XIX trimer. DR IntAct; Q14993; 1. DR STRING; 9606.ENSP00000480474; -. DR GlyGen; Q14993; 3 sites, 1 O-linked glycan (3 sites). DR iPTMnet; Q14993; -. DR PhosphoSitePlus; Q14993; -. DR BioMuta; COL19A1; -. DR DMDM; 68840003; -. DR jPOST; Q14993; -. DR MassIVE; Q14993; -. DR PaxDb; 9606-ENSP00000480474; -. DR PeptideAtlas; Q14993; -. DR ProteomicsDB; 60277; -. DR Antibodypedia; 31201; 222 antibodies from 27 providers. DR DNASU; 1310; -. DR Ensembl; ENST00000620364.5; ENSP00000480474.1; ENSG00000082293.13. DR GeneID; 1310; -. DR KEGG; hsa:1310; -. DR MANE-Select; ENST00000620364.5; ENSP00000480474.1; NM_001858.6; NP_001849.2. DR UCSC; uc032xam.2; human. DR AGR; HGNC:2196; -. DR CTD; 1310; -. DR DisGeNET; 1310; -. DR GeneCards; COL19A1; -. DR HGNC; HGNC:2196; COL19A1. DR HPA; ENSG00000082293; Tissue enhanced (brain, lymphoid tissue, urinary bladder). DR MIM; 120165; gene. DR neXtProt; NX_Q14993; -. DR OpenTargets; ENSG00000082293; -. DR PharmGKB; PA26712; -. DR VEuPathDB; HostDB:ENSG00000082293; -. DR eggNOG; KOG3544; Eukaryota. DR GeneTree; ENSGT00940000158276; -. DR HOGENOM; CLU_282267_0_0_1; -. DR InParanoid; Q14993; -. DR OMA; FMFQATE; -. DR OrthoDB; 3809795at2759; -. DR PhylomeDB; Q14993; -. DR TreeFam; TF351778; -. DR PathwayCommons; Q14993; -. DR Reactome; R-HSA-1442490; Collagen degradation. DR Reactome; R-HSA-1650814; Collagen biosynthesis and modifying enzymes. DR Reactome; R-HSA-8948216; Collagen chain trimerization. DR SignaLink; Q14993; -. DR BioGRID-ORCS; 1310; 12 hits in 1149 CRISPR screens. DR ChiTaRS; COL19A1; human. DR GeneWiki; Collagen,_type_XIX,_alpha_1; -. DR GenomeRNAi; 1310; -. DR Pharos; Q14993; Tbio. DR PRO; PR:Q14993; -. DR Proteomes; UP000005640; Chromosome 6. DR RNAct; Q14993; Protein. DR Bgee; ENSG00000082293; Expressed in male germ line stem cell (sensu Vertebrata) in testis and 110 other cell types or tissues. DR ExpressionAtlas; Q14993; baseline and differential. DR GO; GO:0005581; C:collagen trimer; TAS:ProtInc. DR GO; GO:0062023; C:collagen-containing extracellular matrix; HDA:BHF-UCL. DR GO; GO:0005788; C:endoplasmic reticulum lumen; TAS:Reactome. DR GO; GO:0031012; C:extracellular matrix; NAS:UniProtKB. DR GO; GO:0005576; C:extracellular region; TAS:Reactome. DR GO; GO:0005615; C:extracellular space; IBA:GO_Central. DR GO; GO:0005201; F:extracellular matrix structural constituent; NAS:UniProtKB. DR GO; GO:0030020; F:extracellular matrix structural constituent conferring tensile strength; IBA:GO_Central. DR GO; GO:0030674; F:protein-macromolecule adaptor activity; NAS:UniProtKB. DR GO; GO:0007155; P:cell adhesion; NAS:UniProtKB. DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW. DR GO; GO:0098609; P:cell-cell adhesion; NAS:UniProtKB. DR GO; GO:0030198; P:extracellular matrix organization; IBA:GO_Central. DR GO; GO:0007519; P:skeletal muscle tissue development; IEA:Ensembl. DR GO; GO:0001501; P:skeletal system development; TAS:ProtInc. DR Gene3D; 2.60.120.200; -; 1. DR InterPro; IPR008160; Collagen. DR InterPro; IPR013320; ConA-like_dom_sf. DR InterPro; IPR048287; TSPN-like_N. DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1. DR PANTHER; PTHR24023:SF938; COLLAGEN ALPHA-1(XIX) CHAIN; 1. DR Pfam; PF01391; Collagen; 10. DR SMART; SM00210; TSPN; 1. DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1. DR Genevisible; Q14993; HS. PE 1: Evidence at protein level; KW Cell adhesion; Collagen; Developmental protein; Differentiation; KW Disulfide bond; Extracellular matrix; Hydroxylation; Myogenesis; KW Reference proteome; Repeat; Secreted; Signal. FT SIGNAL 1..23 FT /evidence="ECO:0000255" FT CHAIN 24..1142 FT /note="Collagen alpha-1(XIX) chain" FT /id="PRO_0000005797" FT DOMAIN 50..234 FT /note="Laminin G-like" FT DOMAIN 292..349 FT /note="Collagen-like 1" FT DOMAIN 350..391 FT /note="Collagen-like 2" FT DOMAIN 392..433 FT /note="Collagen-like 3" FT DOMAIN 474..516 FT /note="Collagen-like 4" FT DOMAIN 568..624 FT /note="Collagen-like 5" FT DOMAIN 626..678 FT /note="Collagen-like 6" FT DOMAIN 728..778 FT /note="Collagen-like 7" FT DOMAIN 779..814 FT /note="Collagen-like 8" FT DOMAIN 845..903 FT /note="Collagen-like 9" FT DOMAIN 904..947 FT /note="Collagen-like 10" FT DOMAIN 948..1004 FT /note="Collagen-like 11" FT REGION 288..680 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 292..351 FT /note="Triple-helical region 1 (COL1)" FT REGION 370..429 FT /note="Triple-helical region 2 (COL2)" FT REGION 448..688 FT /note="Triple-helical region 3 (COL3)" FT REGION 700..818 FT /note="Triple-helical region 4 (COL4)" FT REGION 704..1009 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 833..1012 FT /note="Triple-helical region 5 (COL5)" FT REGION 1053..1142 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT REGION 1054..1111 FT /note="Triple-helical region 6 (COL6)" FT MOTIF 952..954 FT /note="Cell attachment site" FT /evidence="ECO:0000255" FT COMPBIAS 334..348 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 377..391 FT /note="Pro residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 416..430 FT /note="Pro residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 445..459 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 839..854 FT /note="Pro residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT VARIANT 352 FT /note="A -> G (in dbSNP:rs2273426)" FT /id="VAR_024419" FT VARIANT 361 FT /note="G -> D (in a breast cancer sample; somatic mutation; FT dbSNP:rs1313704586)" FT /evidence="ECO:0000269|PubMed:16959974" FT /id="VAR_035746" FT VARIANT 406 FT /note="G -> E (in dbSNP:rs13204209)" FT /id="VAR_048782" FT VARIANT 496 FT /note="E -> G (in dbSNP:rs13204209)" FT /id="VAR_048783" FT VARIANT 1019 FT /note="K -> N (in a breast cancer sample; somatic mutation; FT dbSNP:rs771562232)" FT /evidence="ECO:0000269|PubMed:16959974" FT /id="VAR_035747" FT CONFLICT 89 FT /note="I -> MY (in Ref. 2; BAA23309)" FT /evidence="ECO:0000305" FT CONFLICT 106..119 FT /note="FRVRRNAKKERWFL -> ETTVPFWRFFVLET (in Ref. 6; FT AAA36358)" FT /evidence="ECO:0000305" FT CONFLICT 279 FT /note="Q -> L (in Ref. 1; BAA07368)" FT /evidence="ECO:0000305" FT CONFLICT 354..355 FT /note="AG -> GC (in Ref. 5; AAA58468)" FT /evidence="ECO:0000305" FT CONFLICT 365 FT /note="D -> V (in Ref. 1; BAA07368 and 5; AAA58468)" FT /evidence="ECO:0000305" FT CONFLICT 441..442 FT /note="YY -> DD (in Ref. 1; BAA07368 and 5; AAA58468)" FT /evidence="ECO:0000305" FT CONFLICT 622..624 FT /note="PQG -> QRD (in Ref. 5; AAA58468)" FT /evidence="ECO:0000305" FT CONFLICT 816..823 FT /note="GIPFNERN -> VSCSRLKI (in Ref. 6; AAA36358)" FT /evidence="ECO:0000305" FT CONFLICT 937 FT /note="Q -> E (in Ref. 1; BAA07368)" FT /evidence="ECO:0000305" FT CONFLICT 1140 FT /note="G -> C (in Ref. 2; BAA23309)" FT /evidence="ECO:0000305" SQ SEQUENCE 1142 AA; 115221 MW; F1153CE751387943 CRC64; MRLTGPWKLW LWMSIFLLPA STSVTVRDKT EESCPILRIE GHQLTYDNIN KLEVSGFDLG DSFSLRRAFC ESDKTCFKLG SALLIRDTIK IFPKGLPEEY SVAAMFRVRR NAKKERWFLW QVLNQQNIPQ ISIVVDGGKK VVEFMFQATE GDVLNYIFRN RELRPLFDRQ WHKLGISIQS QVISLYMDCN LIARRQTDEK DTVDFHGRTV IATRASDGKP VDIELHQLKI YCSANLIAQE TCCEISDTKC PEQDGFGNIA SSWVTAHASK MSSYLPAKQE LKDQCQCIPN KGEAGLPGAP GSPGQKGHKG EPGENGLHGA PGFPGQKGEQ GFEGSKGETG EKGEQGEKGD PALAGLNGEN GLKGDLGPHG PPGPKGEKGD TGPPGPPALP GSLGIQGPQG PPGKEGQRGR RGKTGPPGKP GPPGPPGPPG IQGIHQTLGG YYNKDNKGND EHEAGGLKGD KGETGLPGFP GSVGPKGQKG EPGEPFTKGE KGDRGEPGVI GSQGVKGEPG DPGPPGLIGS PGLKGQQGSA GSMGPRGPPG DVGLPGEHGI PGKQGIKGEK GDPGGIIGPP GLPGPKGEAG PPGKSLPGEP GLDGNPGAPG PRGPKGERGL PGVHGSPGDI GPQGIGIPGR TGAQGPAGEP GIQGPRGLPG LPGTPGTPGN DGVPGRDGKP GLPGPPGDPI ALPLLGDIGA LLKNFCGNCQ ASVPGLKSNK GEEGGAGEPG KYDSMARKGD IGPRGPPGIP GREGPKGSKG ERGYPGIPGE KGDEGLQGIP GIPGAPGPTG PPGLMGRTGH PGPTGAKGEK GSDGPPGKPG PPGPPGIPFN ERNGMSSLYK IKGGVNVPSY PGPPGPPGPK GDPGPVGEPG AMGLPGLEGF PGVKGDRGPA GPPGIAGMSG KPGAPGPPGV PGEPGERGPV GDIGFPGPEG PSGKPGINGK DGIPGAQGIM GKPGDRGPKG ERGDQGIPGD RGSQGERGKP GLTGMKGAIG PMGPPGNKGS MGSPGHQGPP GSPGIPGIPA DAVSFEEIKK YINQEVLRIF EERMAVFLSQ LKLPAAMLAA QAYGRPGPPG KDGLPGPPGD PGPQGYRGQK GERGEPGIGL PGSPGLPGTS ALGLPGSPGA PGPQGPPGPS GRCNPEDCLY PVSHAHQRTG GN //