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Q14721

- KCNB1_HUMAN

UniProt

Q14721 - KCNB1_HUMAN

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Protein

Potassium voltage-gated channel subfamily B member 1

Gene

KCNB1

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli

Functioni

Mediates the voltage-dependent potassium ion permeability of excitable membranes. Channels open or close in response to the voltage difference across the membrane, letting potassium ions pass in accordance with their electrochemical gradient.

GO - Molecular functioni

  1. delayed rectifier potassium channel activity Source: RefGenome
  2. outward rectifier potassium channel activity Source: Ensembl

GO - Biological processi

  1. energy reserve metabolic process Source: Reactome
  2. protein homooligomerization Source: InterPro
  3. regulation of insulin secretion Source: Reactome
  4. small molecule metabolic process Source: Reactome
  5. synaptic transmission Source: Reactome
Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Potassium channel, Voltage-gated channel

Keywords - Biological processi

Ion transport, Potassium transport, Transport

Keywords - Ligandi

Potassium

Enzyme and pathway databases

ReactomeiREACT_18274. Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
REACT_75770. Voltage gated Potassium channels.

Protein family/group databases

TCDBi1.A.1.2.11. the voltage-gated ion channel (vic) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Potassium voltage-gated channel subfamily B member 1
Alternative name(s):
Delayed rectifier potassium channel 1
Short name:
DRK1
Short name:
h-DRK1
Voltage-gated potassium channel subunit Kv2.1
Gene namesi
Name:KCNB1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 20

Organism-specific databases

HGNCiHGNC:6231. KCNB1.

Subcellular locationi

GO - Cellular componenti

  1. dendrite Source: Ensembl
  2. dendrite membrane Source: Ensembl
  3. neuronal cell body membrane Source: Ensembl
  4. plasma membrane Source: Reactome
  5. postsynaptic membrane Source: Ensembl
  6. voltage-gated potassium channel complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA209.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 858858Potassium voltage-gated channel subfamily B member 1PRO_0000054042Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei15 – 151PhosphoserineBy similarity
Modified residuei128 – 1281Phosphotyrosine; by SrcBy similarity
Modified residuei457 – 4571PhosphoserineBy similarity
Modified residuei484 – 4841PhosphoserineBy similarity
Modified residuei496 – 4961PhosphoserineBy similarity
Modified residuei503 – 5031PhosphoserineBy similarity
Modified residuei520 – 5201PhosphoserineBy similarity
Modified residuei541 – 5411PhosphoserineBy similarity
Modified residuei567 – 5671PhosphoserineBy similarity
Modified residuei590 – 5901PhosphoserineBy similarity
Modified residuei607 – 6071PhosphoserineBy similarity
Modified residuei656 – 6561PhosphoserineBy similarity
Modified residuei720 – 7201PhosphoserineBy similarity
Modified residuei772 – 7721PhosphoserineBy similarity
Modified residuei800 – 8001PhosphoserineBy similarity
Modified residuei805 – 8051PhosphoserineBy similarity

Post-translational modificationi

Highly phosphorylated on serine residues in the C-terminal. Differential phosphorylation on a subset of serines allows graded activity-dependent regulation of channel gating. Phosphorylation on Ser-457, Ser-541, Ser-567, Ser-607, Ser-656 and Ser-720 as well as the N-terminal Ser-15 are all regulated by calcineurin-mediated dephosphorylation. Particularly, Ser-607 and Tyr-128 are significant sites of voltage-gated regulation through phosphorylation/ dephosphorylation activities. Tyr-128 can be dephosphorylated by PTPalpha and cyt-PTPepsilon. Phosphorylation levels on Ser-607 are supersensitive to neuronal activity. Phosphorylation on Ser-567 is reduced during postnatal development with low levels at P2 and P5. Levels then increase to reach adult levels by P14. Phosphorylation levels on Ser-564 and Ser-607 are greatly reduced during seizures, by 40% and 85% respectively By similarity.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ14721.
PRIDEiQ14721.

2D gel databases

OGPiQ14721.

PTM databases

PhosphoSiteiQ14721.

Expressioni

Gene expression databases

BgeeiQ14721.
CleanExiHS_KCNB1.
GenevestigatoriQ14721.

Organism-specific databases

HPAiCAB001979.

Interactioni

Subunit structurei

Heteromultimer with KCNG2, KCNG3, KCNG4, KCNS1, KCNS2, KCNS3 and KCNV2.By similarity

Protein-protein interaction databases

BioGridi109947. 16 interactions.
IntActiQ14721. 1 interaction.
STRINGi9606.ENSP00000360806.

Structurei

3D structure databases

ProteinModelPortaliQ14721.
SMRiQ14721. Positions 30-462.
ModBaseiSearch...
MobiDBiSearch...

Topological domain

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 186186CytoplasmicSequence AnalysisAdd
BLAST
Topological domaini251 – 26010CytoplasmicSequence Analysis
Topological domaini317 – 33014CytoplasmicSequence AnalysisAdd
BLAST
Topological domaini415 – 858444CytoplasmicSequence AnalysisAdd
BLAST

Intramembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Intramembranei365 – 38521Pore-forming; Name=Segment H5Sequence AnalysisAdd
BLAST

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei187 – 20822Helical; Name=Segment S1Sequence AnalysisAdd
BLAST
Transmembranei229 – 25022Helical; Name=Segment S2Sequence AnalysisAdd
BLAST
Transmembranei261 – 28222Helical; Name=Segment S3Sequence AnalysisAdd
BLAST
Transmembranei295 – 31622Helical; Voltage-sensor; Name=Segment S4Sequence AnalysisAdd
BLAST
Transmembranei331 – 35222Helical; Name=Segment S5Sequence AnalysisAdd
BLAST
Transmembranei393 – 41422Helical; Name=Segment S6Sequence AnalysisAdd
BLAST

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi377 – 3826Selectivity filterBy similarity

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi517 – 5204Poly-Ser
Compositional biasi701 – 7066Poly-Ala

Domaini

The segment S4 is probably the voltage-sensor and is characterized by a series of positively charged amino acids at every third position.
The tail may be important in modulation of channel activity and/or targeting of the channel to specific subcellular compartments.

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1226.
GeneTreeiENSGT00760000118981.
HOGENOMiHOG000113206.
HOVERGENiHBG052225.
InParanoidiQ14721.
KOiK04885.
OMAiCATDFPE.
OrthoDBiEOG7CRTPP.
PhylomeDBiQ14721.
TreeFamiTF313103.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
3.30.710.10. 1 hit.
InterProiIPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003091. K_chnl.
IPR003968. K_chnl_volt-dep_Kv.
IPR003973. K_chnl_volt-dep_Kv2.
IPR004350. K_chnl_volt-dep_Kv2.1.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
PF03521. Kv2channel. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01514. KV21CHANNEL.
PR01491. KVCHANNEL.
PR01495. SHABCHANNEL.
SMARTiSM00225. BTB. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q14721-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPAGMTKHGS RSTSSLPPEP MEIVRSKACS RRVRLNVGGL AHEVLWRTLD
60 70 80 90 100
RLPRTRLGKL RDCNTHDSLL EVCDDYSLDD NEYFFDRHPG AFTSILNFYR
110 120 130 140 150
TGRLHMMEEM CALSFSQELD YWGIDEIYLE SCCQARYHQK KEQMNEELKR
160 170 180 190 200
EAETLREREG EEFDNTCCAE KRKKLWDLLE KPNSSVAAKI LAIISIMFIV
210 220 230 240 250
LSTIALSLNT LPELQSLDEF GQSTDNPQLA HVEAVCIAWF TMEYLLRFLS
260 270 280 290 300
SPKKWKFFKG PLNAIDLLAI LPYYVTIFLT ESNKSVLQFQ NVRRVVQIFR
310 320 330 340 350
IMRILRILKL ARHSTGLQSL GFTLRRSYNE LGLLILFLAM GIMIFSSLVF
360 370 380 390 400
FAEKDEDDTK FKSIPASFWW ATITMTTVGY GDIYPKTLLG KIVGGLCCIA
410 420 430 440 450
GVLVIALPIP IIVNNFSEFY KEQKRQEKAI KRREALERAK RNGSIVSMNM
460 470 480 490 500
KDAFARSIEM MDIVVEKNGE NMGKKDKVQD NHLSPNKWKW TKRTLSETSS
510 520 530 540 550
SKSFETKEQG SPEKARSSSS PQHLNVQQLE DMYNKMAKTQ SQPILNTKES
560 570 580 590 600
AAQSKPKEEL EMESIPSPVA PLPTRTEGVI DMRSMSSIDS FISCATDFPE
610 620 630 640 650
ATRFSHSPLT SLPSKTGGST APEVGWRGAL GASGGRFVEA NPSPDASQHS
660 670 680 690 700
SFFIESPKSS MKTNNPLKLR ALKVNFMEGD PSPLLPVLGM YHDPLRNRGS
710 720 730 740 750
AAAAVAGLEC ATLLDKAVLS PESSIYTTAS AKTPPRSPEK HTAIAFNFEA
760 770 780 790 800
GVHQYIDADT DDEGQLLYSV DSSPPKSLPG STSPKFSTGT RSEKNHFESS
810 820 830 840 850
PLPTSPKFLR QNCIYSTEAL TGKGPSGQEK CKLENHISPD VRVLPGGGAH

GSTRDQSI
Length:858
Mass (Da):95,878
Last modified:October 25, 2002 - v2
Checksum:iC4B426174ED0DEE4
GO

Sequence cautioni

The sequence AAA36156.1 differs from that shown. Reason: Erroneous initiation.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti616 – 6161T → N.
Corresponds to variant rs2229006 [ dbSNP | Ensembl ].
VAR_062182
Natural varianti616 – 6161T → S.
Corresponds to variant rs2229006 [ dbSNP | Ensembl ].
VAR_062183
Natural varianti825 – 8251P → S.
Corresponds to variant rs34467662 [ dbSNP | Ensembl ].
VAR_034049
Natural varianti857 – 8571S → N.
Corresponds to variant rs34280195 [ dbSNP | Ensembl ].
VAR_062184

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X68302 Genomic DNA. Translation: CAA48374.1.
L02840 mRNA. Translation: AAA36156.1. Different initiation.
AF026005 mRNA. Translation: AAB88808.1.
AL035685 Genomic DNA. Translation: CAB89417.1.
CCDSiCCDS13418.1.
PIRiS31761.
RefSeqiNP_004966.1. NM_004975.2.
XP_006723847.1. XM_006723784.1.
UniGeneiHs.84244.

Genome annotation databases

EnsembliENST00000371741; ENSP00000360806; ENSG00000158445.
GeneIDi3745.
KEGGihsa:3745.
UCSCiuc002xur.1. human.

Polymorphism databases

DMDMi24418854.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X68302 Genomic DNA. Translation: CAA48374.1 .
L02840 mRNA. Translation: AAA36156.1 . Different initiation.
AF026005 mRNA. Translation: AAB88808.1 .
AL035685 Genomic DNA. Translation: CAB89417.1 .
CCDSi CCDS13418.1.
PIRi S31761.
RefSeqi NP_004966.1. NM_004975.2.
XP_006723847.1. XM_006723784.1.
UniGenei Hs.84244.

3D structure databases

ProteinModelPortali Q14721.
SMRi Q14721. Positions 30-462.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 109947. 16 interactions.
IntActi Q14721. 1 interaction.
STRINGi 9606.ENSP00000360806.

Chemistry

ChEMBLi CHEMBL2362996.
DrugBanki DB06637. Dalfampridine.
GuidetoPHARMACOLOGYi 546.

Protein family/group databases

TCDBi 1.A.1.2.11. the voltage-gated ion channel (vic) superfamily.

PTM databases

PhosphoSitei Q14721.

Polymorphism databases

DMDMi 24418854.

2D gel databases

OGPi Q14721.

Proteomic databases

PaxDbi Q14721.
PRIDEi Q14721.

Protocols and materials databases

DNASUi 3745.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000371741 ; ENSP00000360806 ; ENSG00000158445 .
GeneIDi 3745.
KEGGi hsa:3745.
UCSCi uc002xur.1. human.

Organism-specific databases

CTDi 3745.
GeneCardsi GC20M047984.
HGNCi HGNC:6231. KCNB1.
HPAi CAB001979.
MIMi 600397. gene.
neXtProti NX_Q14721.
PharmGKBi PA209.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG1226.
GeneTreei ENSGT00760000118981.
HOGENOMi HOG000113206.
HOVERGENi HBG052225.
InParanoidi Q14721.
KOi K04885.
OMAi CATDFPE.
OrthoDBi EOG7CRTPP.
PhylomeDBi Q14721.
TreeFami TF313103.

Enzyme and pathway databases

Reactomei REACT_18274. Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
REACT_75770. Voltage gated Potassium channels.

Miscellaneous databases

GeneWikii KCNB1.
GenomeRNAii 3745.
NextBioi 14655.
PROi Q14721.
SOURCEi Search...

Gene expression databases

Bgeei Q14721.
CleanExi HS_KCNB1.
Genevestigatori Q14721.

Family and domain databases

Gene3Di 1.20.120.350. 1 hit.
3.30.710.10. 1 hit.
InterProi IPR000210. BTB/POZ-like.
IPR011333. BTB/POZ_fold.
IPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003091. K_chnl.
IPR003968. K_chnl_volt-dep_Kv.
IPR003973. K_chnl_volt-dep_Kv2.
IPR004350. K_chnl_volt-dep_Kv2.1.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view ]
PANTHERi PTHR11537. PTHR11537. 1 hit.
Pfami PF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
PF03521. Kv2channel. 1 hit.
[Graphical view ]
PRINTSi PR00169. KCHANNEL.
PR01514. KV21CHANNEL.
PR01491. KVCHANNEL.
PR01495. SHABCHANNEL.
SMARTi SM00225. BTB. 1 hit.
[Graphical view ]
SUPFAMi SSF54695. SSF54695. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of a human delayed rectifier potassium channel gene."
    Albrecht B., Lorra C., Stocker K., Pongs O.
    Recept. Channels 1:99-110(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Heterologous expression of the human potassium channel Kv2.1 in clonal mammalian cells by direct cytoplasmic microinjection of cRNA."
    Ikeda S.R., Soler F., Zuhlke R.D., Joho R.H., Lewis D.L.
    Pflugers Arch. 422:201-203(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Brain cortex.
  3. "Identification of potassium channels in human lens epithelium."
    Rae J.L., Shepard A.R.
    (In) Civan M.M. (eds.); The eye's aqueous humor-from secretion to glaucoma, pp.69-104, Academic Press, San Diego (1998)
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Tissue: Lens epithelium.
  4. "The DNA sequence and comparative analysis of human chromosome 20."
    Deloukas P., Matthews L.H., Ashurst J.L., Burton J., Gilbert J.G.R., Jones M., Stavrides G., Almeida J.P., Babbage A.K., Bagguley C.L., Bailey J., Barlow K.F., Bates K.N., Beard L.M., Beare D.M., Beasley O.P., Bird C.P., Blakey S.E.
    , Bridgeman A.M., Brown A.J., Buck D., Burrill W.D., Butler A.P., Carder C., Carter N.P., Chapman J.C., Clamp M., Clark G., Clark L.N., Clark S.Y., Clee C.M., Clegg S., Cobley V.E., Collier R.E., Connor R.E., Corby N.R., Coulson A., Coville G.J., Deadman R., Dhami P.D., Dunn M., Ellington A.G., Frankland J.A., Fraser A., French L., Garner P., Grafham D.V., Griffiths C., Griffiths M.N.D., Gwilliam R., Hall R.E., Hammond S., Harley J.L., Heath P.D., Ho S., Holden J.L., Howden P.J., Huckle E., Hunt A.R., Hunt S.E., Jekosch K., Johnson C.M., Johnson D., Kay M.P., Kimberley A.M., King A., Knights A., Laird G.K., Lawlor S., Lehvaeslaiho M.H., Leversha M.A., Lloyd C., Lloyd D.M., Lovell J.D., Marsh V.L., Martin S.L., McConnachie L.J., McLay K., McMurray A.A., Milne S.A., Mistry D., Moore M.J.F., Mullikin J.C., Nickerson T., Oliver K., Parker A., Patel R., Pearce T.A.V., Peck A.I., Phillimore B.J.C.T., Prathalingam S.R., Plumb R.W., Ramsay H., Rice C.M., Ross M.T., Scott C.E., Sehra H.K., Shownkeen R., Sims S., Skuce C.D., Smith M.L., Soderlund C., Steward C.A., Sulston J.E., Swann R.M., Sycamore N., Taylor R., Tee L., Thomas D.W., Thorpe A., Tracey A., Tromans A.C., Vaudin M., Wall M., Wallis J.M., Whitehead S.L., Whittaker P., Willey D.L., Williams L., Williams S.A., Wilming L., Wray P.W., Hubbard T., Durbin R.M., Bentley D.R., Beck S., Rogers J.
    Nature 414:865-871(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiKCNB1_HUMAN
AccessioniPrimary (citable) accession number: Q14721
Secondary accession number(s): Q14193
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: October 25, 2002
Last modified: October 29, 2014
This is version 128 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 20
    Human chromosome 20: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3