Q14687 (GSE1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 80.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Genetic suppressor element 1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1217 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Subunit structure | May be a component of a BHC histone deacetylase complex that contains HDAC1, HDAC2, HMG20B/BRAF35, KDM1A, RCOR1/CoREST, PHF21A/BHC80, ZMYM2, ZNF217, ZMYM3, GSE1 and GTF2I. |
| Sequence caution | The sequence BAA11499.2 differs from that shown. Reason: Erroneous initiation. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Coiled coil |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| None. [Check GOA] | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| RCOR3 | Q9P2K3 | 3 | EBI-372619,EBI-743428 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q14687-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q14687-2) The sequence of this isoform differs from the canonical sequence as follows: 1-104: Missing. | ||||||
| Isoform 3 (identifier: Q14687-3) The sequence of this isoform differs from the canonical sequence as follows: 3-75: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1217 | 1217 | Genetic suppressor element 1 | PRO_0000050730 | |||||
Regions | |||||||||
| Coiled coil | 321 – 403 | 83 | Potential | ||||||
| Coiled coil | 1127 – 1201 | 75 | Potential | ||||||
| Compositional bias | 532 – 722 | 191 | Pro-rich | ||||||
| Compositional bias | 745 – 748 | 4 | Poly-Arg | ||||||
| Compositional bias | 1102 – 1107 | 6 | Poly-Glu | ||||||
Amino acid modifications | |||||||||
| Modified residue | 84 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 496 | 1 | N6-acetyllysine Ref.6 | ||||||
| Modified residue | 739 | 1 | N6-acetyllysine Ref.6 | ||||||
| Modified residue | 766 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 826 | 1 | Phosphoserine Ref.4 | ||||||
| Modified residue | 857 | 1 | Phosphoserine Ref.5 Ref.7 | ||||||
| Modified residue | 907 | 1 | Phosphothreonine Ref.5 | ||||||
| Modified residue | 909 | 1 | Phosphoserine Ref.4 Ref.5 Ref.7 | ||||||
| Modified residue | 1101 | 1 | Phosphoserine Ref.4 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 104 | 104 | Missing in isoform 2. | VSP_021820 | |||||
| Alternative sequence | 3 – 75 | 73 | Missing in isoform 3. | VSP_021821 | |||||
| Natural variant | 627 | 1 | R → W in a colorectal cancer sample; somatic mutation. Ref.10 | VAR_035926 | |||||
| Natural variant | 936 | 1 | V → A. Ref.3 Corresponds to variant rs17853763 [ dbSNP | Ensembl ]. | VAR_029546 | |||||
| Natural variant | 1153 | 1 | R → Q. Corresponds to variant rs2303203 [ dbSNP | Ensembl ]. | VAR_029547 | |||||
Experimental info | |||||||||
| Sequence conflict | 444 | 1 | G → S in BAA11499. Ref.1 | ||||||
Sequences
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References
| [1] | "Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1." Nagase T., Seki N., Ishikawa K., Tanaka A., Nomura N. DNA Res. 3:17-24(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Bone marrow. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANT ALA-936. Tissue: Lung and Placenta. |
| [4] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-826; SER-909 AND SER-1101, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [5] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-84; SER-766; SER-857; THR-907 AND SER-909, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [6] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-496 AND LYS-739, MASS SPECTROMETRY. |
| [7] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-857 AND SER-909, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [9] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [10] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] TRP-627. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | D80004 mRNA. Translation: BAA11499.2. Different initiation. CH471114 Genomic DNA. Translation: EAW95445.1. CH471114 Genomic DNA. Translation: EAW95447.1. BC000753 mRNA. Translation: AAH00753.2. BC009854 mRNA. Translation: AAH09854.2. BC037556 mRNA. Translation: AAH37556.1. BQ214916 mRNA. No translation available. |
| IPI | IPI00215963. IPI00807501. IPI00807714. |
| RefSeq | NP_001127945.1. NM_001134473.1. NP_055430.1. NM_014615.2. |
| UniGene | Hs.461647. |
3D structure databases | |
| ProteinModelPortal | Q14687. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q14687. 11 interactions. |
| STRING | 9606.ENSP00000253458. |
PTM databases | |
| PhosphoSite | Q14687. |
Polymorphism databases | |
| DMDM | 126302550. |
Proteomic databases | |
| PaxDb | Q14687. |
| PRIDE | Q14687. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000253458; ENSP00000253458; ENSG00000131149. ENST00000393243; ENSP00000376934; ENSG00000131149. ENST00000405402; ENSP00000384839; ENSG00000131149. |
| GeneID | 23199. |
| KEGG | hsa:23199. |
| UCSC | uc002fiw.3. human. uc002fiy.3. human. |
Organism-specific databases | |
| CTD | 23199. |
| GeneCards | GC16P085645. |
| HGNC | HGNC:28979. GSE1. |
| HPA | HPA036365. |
| neXtProt | NX_Q14687. |
| PharmGKB | PA143485512. |
| HUGE | Search... |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG46383. |
| HOGENOM | HOG000112825. |
| HOVERGEN | HBG079773. |
| InParanoid | Q14687. |
| OMA | ERVYCPE. |
| PhylomeDB | Q14687. |
Gene expression databases | |
| ArrayExpress | Q14687. |
| Bgee | Q14687. |
| CleanEx | HS_KIAA0182. |
| Genevestigator | Q14687. |
| GermOnline | ENSG00000131149. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR022207. GSE-like. [Graphical view] |
| Pfam | PF12540. DUF3736. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| GenomeRNAi | 23199. |
| NextBio | 44711. |
Entry information
| Entry name | GSE1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q14687 Secondary accession number(s): D3DUM4 Q9BW09 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 16 Human chromosome 16: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |

Clusters with
