Reviewed,
UniProtKB/Swiss-Prot Q14155 (ARHG7_HUMAN)
Last modified
June 16, 2009.
Version 102.
History...
Clusters with 100%,
90%,
50% identity |
Documents (4) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Rho guanine nucleotide exchange factor 7 Alternative name(s): PAK-interacting exchange factor beta Beta-Pix COOL-1 p85 | ||||||
| Gene names |
| ||||||
| Organism | Homo sapiens (Human) | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 803 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Acts as a RAC1 guanine nucleotide exchange factor (GEF) and can induce membrane ruffling By similarity. |
| Subunit structure | Interacts with PAK kinases through the SH3 domain. Interacts with GIT1 and TGFB1I1. Interacts with ITCH By similarity. Interacts with unphosphorylated PAK1. |
| Sequence similarities | Contains 1 CH (calponin-homology) domain. Contains 1 DH (DBL-homology) domain. Contains 1 PH domain. Contains 1 SH3 domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing |
| Domain | SH3 domain |
| Molecular function | Guanine-nucleotide releasing factor |
| PTM | Phosphoprotein |
| Technical term | 3D-structure |
| Gene Ontology (GO) | |
| Biological process | intracellular signaling cascade Inferred from electronic annotation. Source: InterPro regulation of Rho protein signal transductionInferred from electronic annotation. Source: InterPro |
| Cellular component | cytosol Inferred from Experiment. Source: Reactome nucleolusInferred from direct assay. Source: HPA |
| Molecular function | Rho guanyl-nucleotide exchange factor activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 6 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 4 (identifier: Q14155-4) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 1 (identifier: Q14155-1) The sequence of this isoform differs from the canonical sequence as follows: 1-178: Missing. 733-803: TWQGTDLMHN...SCCSYISHQN → SSRKESAPQV...NDPAWDETNL | ||||||
| Isoform 2 (identifier: Q14155-2) The sequence of this isoform differs from the canonical sequence as follows: 56-105: Missing. | ||||||
| Isoform 3 (identifier: Q14155-3) The sequence of this isoform differs from the canonical sequence as follows: 85-105: Missing. | ||||||
| Isoform 5 (identifier: Q14155-5) The sequence of this isoform differs from the canonical sequence as follows: 85-177: Missing. 733-803: TWQGTDLMHN...SCCSYISHQN → SSRKESAPQV...NDPAWDETNL | ||||||
| Isoform 6 (identifier: Q14155-6) The sequence of this isoform differs from the canonical sequence as follows: 1-178: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 803 | 803 | Rho guanine nucleotide exchange factor 7 | PRO_0000080921 | ||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||
| Domain | 1 – 132 | 132 | CH | |||||||||||||||||||||||||||||||||||||||
| Domain | 184 – 243 | 60 | SH3 | |||||||||||||||||||||||||||||||||||||||
| Domain | 271 – 451 | 181 | DH | |||||||||||||||||||||||||||||||||||||||
| Domain | 473 – 578 | 106 | PH | |||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 176 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||||||||||||||
| Modified residue | 249 | 1 | Phosphoserine Ref.9 | |||||||||||||||||||||||||||||||||||||||
| Modified residue | 518 | 1 | Phosphoserine Ref.9 | |||||||||||||||||||||||||||||||||||||||
| Modified residue | 694 | 1 | Phosphoserine Ref.10 | |||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1 – 178 | 178 | Missing in isoform 1 and isoform 6. | VSP_011032 | ||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 56 – 105 | 50 | Missing in isoform 2. | VSP_011033 | ||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 85 – 177 | 93 | Missing in isoform 5. | VSP_034639 | ||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 85 – 105 | 21 | Missing in isoform 3. | VSP_011034 | ||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 733 – 803 | 71 | TWQGT…ISHQN → SSRKESAPQVLLPEEEKIIV EETKSNGQTVIEEKSLVDTV YALKDEVQELRQDNKKMKKS LEEEQRARKDLEKLVRKVLK NMNDPAWDETNL in isoform 1 and isoform 5. | VSP_011035 | ||||||||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 52 – 55 | 4 | TIEK → EEKR in BAD66827. Ref.7 | |||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 343 | 1 | Q → K in AAH33905. Ref.6 | |||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 552 | 1 | M → V in AAH33905. Ref.6 | |||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 595 | 1 | H → D in BAD66827. Ref.7 | |||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 636 | 1 | I → T in AAH50521. Ref.6 | |||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 740 | 1 | M → L in AAH33905. Ref.6 | |||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 188 – 191 | 4 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 210 – 215 | 6 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 218 – 226 | 9 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 229 – 240 | 12 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 271 – 301 | 31 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 302 – 304 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 305 – 310 | 6 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 311 – 313 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 316 – 338 | 23 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 346 – 378 | 33 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 379 – 381 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 382 – 385 | 4 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 386 – 389 | 4 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 395 – 397 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 398 – 402 | 5 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 406 – 408 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 409 – 411 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 413 – 422 | 10 | ||||||||||||||||||||||||||||||||||||||||
| Beta strand | 428 – 430 | 3 | ||||||||||||||||||||||||||||||||||||||||
| Helix | 432 – 453 | 22 | ||||||||||||||||||||||||||||||||||||||||
| Turn | 454 – 456 | 3 | ||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1." Nagase T., Seki N., Tanaka A., Ishikawa K., Nomura N. DNA Res. 2:167-174(1995) [PubMed: 8590280] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Bone marrow. |
| [2] | "A novel regulator of p21-activated kinases." Bagrodia S., Taylor S.J., Jordon K.A., Van Aelst L., Cerione R.A. J. Biol. Chem. 273:23633-23636(1998) [PubMed: 9726964] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [3] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Blocker H., Heubner D., Hoerlein A., Michel G., Wedler H., Kohrer K., Ottenwalder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Amygdala. |
| [4] | "The DNA sequence and analysis of human chromosome 13." Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T. Ross M.T.Nature 428:522-528(2004) [PubMed: 15057823] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 4). Tissue: Brain and Testis. |
| [7] | "Alternative splice variants encoding unstable protein domains exist in the human brain." Homma K., Kikuno R.F., Nagase T., Ohara O., Nishikawa K. J. Mol. Biol. 343:1207-1220(2004) [PubMed: 15491607] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 52-803 (ISOFORM 5). |
| [8] | "Neuroblastoma oligo-capping cDNA project: toward the understanding of the genesis and biology of neuroblastoma." Ohira M., Morohashi A., Nakamura Y., Isogai E., Furuya K., Hamano S., Machida T., Aoyama M., Fukumura M., Miyazaki K., Suzuki Y., Sugano S., Hirato J., Nakagawara A. Cancer Lett. 197:63-68(2003) [PubMed: 12880961] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 433-803. Tissue: Neuroblastoma. |
| [9] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-249 AND SER-518, MASS SPECTROMETRY. Tissue: Epithelium. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-694, MASS SPECTROMETRY. |
| [11] | "Structure and mutagenesis of the Dbl homology domain." Aghazadeh B., Zhu K., Kubiseski T.J., Liu G.A., Pawson T., Zheng Y., Rosen M.K. Nat. Struct. Biol. 5:1098-1107(1998) [PubMed: 9846881] [Abstract] Cited for: STRUCTURE BY NMR OF 260-467. |
| [12] | "Structural analysis of the SH3 domain of beta-PIX and its interaction with alpha-p21 activated kinase (PAK)." Mott H.R., Nietlispach D., Evetts K.A., Owen D. Biochemistry 44:10977-10983(2005) [PubMed: 16101281] [Abstract] Cited for: STRUCTURE BY NMR OF 179-243 OF COMPLEX WITH UNPHOSPHORYLATED PAK1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| D63476 mRNA. Translation: BAA09763.2. Different initiation. AL834228 mRNA. Translation: CAD38906.1. Different initiation. AL390754, AL139086 Genomic DNA. Translation: CAI12461.1. AL139086, AL390754 Genomic DNA. Translation: CAI14671.1. AL390754, AL139086 Genomic DNA. Translation: CAM13628.1. AL139086, AL390754 Genomic DNA. Translation: CAM20788.1. CH471085 Genomic DNA. Translation: EAX09143.1. BC033905 mRNA. Translation: AAH33905.1. BC050521 mRNA. Translation: AAH50521.1. Different initiation. BC060776 mRNA. Translation: AAH60776.1. AB177849 mRNA. Translation: BAD66827.1. AB075521 mRNA. Translation: BAE45764.1. | |||||||||||||||||||
| IPI | IPI00449906. IPI00449907. IPI00449908. IPI00449909. IPI00900260. IPI00900378. | ||||||||||||||||||
| RefSeq | NP_001106983.1. NP_001106984.1. NP_001106985.1. NP_003890.1. NP_663788.1. | ||||||||||||||||||
| UniGene | Hs.508738 | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| |||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | Q14155. 3 interactions. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q14155. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | Q14155. | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENSG00000102606. Homo sapiens. [Contig view] | ||||||||||||||||||
| GeneID | 8874. | ||||||||||||||||||
| KEGG | hsa:8874. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| GeneCards | GC13P110565. | ||||||||||||||||||
| H-InvDB | HIX0011460. HIX0037536. | ||||||||||||||||||
| HGNC | HGNC:15607. ARHGEF7. | ||||||||||||||||||
| HPA | HPA004744. | ||||||||||||||||||
| MIM | 605477. gene. | ||||||||||||||||||
| PharmGKB | PA24977. | ||||||||||||||||||
| HUGE | Search... | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOGENOM | Q14155. | ||||||||||||||||||
| HOVERGEN | Q14155. | ||||||||||||||||||
| OMA | Q14155. TLPSHPI. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Pathway_Interaction_DB | aurora_a_pathway. Aurora A signaling. pi3kcipathway. Class I PI3K signaling events. | ||||||||||||||||||
| Reactome | REACT_11044. Signaling by Rho GTPases. REACT_9417. Signaling by EGFR. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q14155. | ||||||||||||||||||
| Bgee | Q14155. | ||||||||||||||||||
| GermOnline | ENSG00000102606. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR001715. Calponin_act_bd. IPR000219. DH-domain. IPR001331. GDS_CDC24_CS. IPR001849. Pleckstrin_homology. IPR001452. SH3_domain. [Graphical view] | ||||||||||||||||||
| Gene3D | G3DSA:1.10.418.10. Calponin-homology. 1 hit. G3DSA:1.20.900.10. RhoGEF. 1 hit. | ||||||||||||||||||
| Pfam | PF00307. CH. 1 hit. PF00169. PH. 1 hit. PF00621. RhoGEF. 1 hit. PF00018. SH3_1. 1 hit. [Graphical view] | ||||||||||||||||||
| ProDom | PD000066. SH3. 1 hit. [Graphical view] [Entries sharing at least one domain] | ||||||||||||||||||
| SMART | SM00033. CH. 1 hit. SM00233. PH. 1 hit. SM00325. RhoGEF. 1 hit. SM00326. SH3. 1 hit. [Graphical view] | ||||||||||||||||||
| PROSITE | PS50021. CH. 1 hit. PS00741. DH_1. 1 hit. PS50010. DH_2. 1 hit. PS50003. PH_DOMAIN. 1 hit. PS50002. SH3. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other Resources | |||||||||||||||||||
| NextBio | 33313. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | ARHG7_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q14155 Secondary accession number(s): B1ALK6 Q8N3M1 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 13 Human chromosome 13: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


