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Q13Z47 (Q13Z47_BURXL) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABE30642.1
Gene names
ORF Names:Bxe_A2328 EMBL ABE30642.1
OrganismBurkholderia xenovorans (strain LB400) [Complete proteome] [HAMAP] EMBL ABE30642.1
Taxonomic identifier266265 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length1001 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q13Z47 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: C93F40DDE8EC7F7C

FASTA1,001108,786
        10         20         30         40         50         60 
MNDRLDTYNR KRRFDDTPEP AGTRTSRKQG GRKTAGQASP EALSYVIQEH DARRLHYDFR 

        70         80         90        100        110        120 
LELNGTLLSW AVPKGPSLDP SVKRLAVHVE DHPVEYGSFE GEIPLGNYGA GSVIVWDRGT 

       130        140        150        160        170        180 
WEPLGGAAEA ARAYAAGKLK FQLHGEKLHG GWTLVRSHMR GSGDKEQWLL IKERDDEARD 

       190        200        210        220        230        240 
ESKYDILKKR PGSVLADSAA AVKGAKTAKT AAAKSTAKTA SKAAVATATK ATADPDSASL 

       250        260        270        280        290        300 
AKRTGRNGAQ KASSSRADPK RPDIVATRSA QSLRDLAASP SIEGAVPARL PATFKPQLAT 

       310        320        330        340        350        360 
LVDGAPPGNE WSYEIKFDGY RVLVRIDRAT KGSAVKVLTR AGNDWTAKFS KQVKAFEQLD 

       370        380        390        400        410        420 
IESAWLDGEA VVLNQNGVPN FQALQNAFDS NRPQDIVIYL FDIPFLNGYD LRGVPLEQRR 

       430        440        450        460        470        480 
AILRALLEDA DDSVLRFSNN FEFSADDLLR SACDMALEGI IGKRRDSGYM SGRSSAWIKL 

       490        500        510        520        530        540 
KCRRRQEFVI GGYSEPSGSR AAFGALLLGV YDGNGKLQYA GRVGTGFDAA LLRSVKKELD 

       550        560        570        580        590        600 
AHETRHMPFA AAPRERSRTP VHWVEPVLVA ECNFAEWTSD GIVRQASFVS LRSDKPARQI 

       610        620        630        640        650        660 
VKETPRQGAD VQQQTDSVSN DAPTKRAARK TSASAATTSG EGKTRVAKSK TADAKDASTK 

       670        680        690        700        710        720 
SRGVEASGAK GSAAKAAATK PTAATAKAAK ATKTSAAKAN TTSAPGEVAG VRVSHPDRVI 

       730        740        750        760        770        780 
DRSTGTRKID LVRYYESVAD WMLPHLRDRP VSLVRAPEDI DGELFFQKHS QKLSIPNVTQ 

       790        800        810        820        830        840 
HPGLDPGHPP LITVDTLKAL VGAAQMGTVE FHTWNAVVSN IEKPDRMVFD LDPDASLGWE 

       850        860        870        880        890        900 
RMIEAAQLTR SLLEELGLAS FCKTSGGKGF HVVVPLAKQA GWDEVKDFSQ AVAQHMAATL 

       910        920        930        940        950        960 
PRYFSAKMGA QNRKQKIFVD YLRNNRGSST VAAFSARARP GLGVSVPLAW DEVATTTGGA 

       970        980        990       1000 
QWTIENLHER LADLKSDPWA DYAKTRQRIT AAMKKRLDDA Q 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000270 Genomic DNA. Translation: ABE30642.1.
RefSeqYP_558694.1. NC_007951.1.

3D structure databases

ProteinModelPortalQ13Z47.
SMRQ13Z47. Positions 706-997.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266265.Bxe_A2328.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE30642; ABE30642; Bxe_A2328.
GeneID4004661.
KEGGbxe:Bxe_A2328.
PATRIC19329756. VBIBurXen52548_2201.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASACDMAL.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycBXEN266265:GJII-2201-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ13Z47_BURXL
AccessionPrimary (citable) accession number: Q13Z47
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)