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Q13S07

- GLGB_BURXL

UniProt

Q13S07 - GLGB_BURXL

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, Bxeno_B0164, Bxe_B2863
Organism
Burkholderia xenovorans (strain LB400)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei415 – 4151Nucleophile By similarity
Active sitei470 – 4701Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciBXEN266265:GJII-4774-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Bxeno_B0164
ORF Names:Bxe_B2863
OrganismiBurkholderia xenovorans (strain LB400)
Taxonomic identifieri266265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001817: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7367361,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000260641Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi266265.Bxe_B2863.

Structurei

3D structure databases

ProteinModelPortaliQ13S07.
SMRiQ13S07. Positions 124-736.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiHERCPHA.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13S07-1 [UniParc]FASTAAdd to Basket

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MSEHDPAAGL QPLDIDALVE ARHPDPFSQL GLHHTDAGPV VRALLPNAAH    50
VSVISRADGA LLGELEQLRP GLFAGRITSA APYRLRIDWH GVVQEIEDTY 100
SFGPVLGDEP LGRLAGGDPY AVLECLGARP MEVDGVPGVR FAVWAPNARR 150
VSVVGDFNAW DGRRHPMRLR HQAGVWELFV PRVGPGTRYK YELLSRDGHP 200
LPLKADPCAM QTEKPPGTAS IVAHVDEVEQ FPWSDHEWIQ SRAGKQTARS 250
PISIYEVHAE SWLRVAEEGQ RGLDWEELAE RMIPYVKSMG FTHVEFMPIA 300
EHPFGGSWGY QPLGQFAPSA RFGKPEQFAR FVDKAHEAGL GVILDWVPAH 350
FPNDAHGLID FDGTPLYEHA DPREGYHQDW NTMIYNLGRN EVSAFLIASG 400
LAWLKRYHVD GLRVDAVASM LYRDYSRAAD QWVPNIYGGR ENLESIAFLK 450
RLNHEVGYVP GVPGAITIAE ESTAWPGVTA RVEDGGLGFQ FKWNMGWMHD 500
TLHYMEEDPV YRQYHHHNMT FGMVYAYSER FVLPLSHDEV VHGKGSLLGK 550
MPGDRWQKFA NLRAYFGFMW THPGKKLLFM GGEFGQLAEF NHDASPHWHL 600
LDDSNHHGVQ MLVRDLNRLY SDEPALYLLD CEPGGFEWLI GDDSGNSVFA 650
YRRTDGAGRE LVVVCNMTPV PRLGYRIGMP RGGRWVEVLN TDAGVYGGSN 700
MGNGGLIHTD SQSSHGWPHS AALTLPPLAT IVLRAD 736
Length:736
Mass (Da):82,135
Last modified:August 22, 2006 - v1
Checksum:i4D7D9682B44E3CAC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000271 Genomic DNA. Translation: ABE33132.1.
RefSeqiWP_011490512.1. NC_007952.1.
YP_552482.1. NC_007952.1.

Genome annotation databases

EnsemblBacteriaiABE33132; ABE33132; Bxe_B2863.
GeneIDi4006772.
KEGGibxe:Bxe_B2863.
PATRICi19335106. VBIBurXen52548_4828.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000271 Genomic DNA. Translation: ABE33132.1 .
RefSeqi WP_011490512.1. NC_007952.1.
YP_552482.1. NC_007952.1.

3D structure databases

ProteinModelPortali Q13S07.
SMRi Q13S07. Positions 124-736.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266265.Bxe_B2863.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE33132 ; ABE33132 ; Bxe_B2863 .
GeneIDi 4006772.
KEGGi bxe:Bxe_B2863.
PATRICi 19335106. VBIBurXen52548_4828.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi HERCPHA.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci BXEN266265:GJII-4774-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LB400.

Entry informationi

Entry nameiGLGB_BURXL
AccessioniPrimary (citable) accession number: Q13S07
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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