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Q13MP2

- Q13MP2_BURXL

UniProt

Q13MP2 - Q13MP2_BURXL

Protein
Submitted name:

DNA ligase (ATP)

Gene

Bxe_B1315

Organism
Burkholderia xenovorans (strain LB400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBXEN266265:GJII-6336-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:Bxe_B1315Imported
    OrganismiBurkholderia xenovorans (strain LB400)Imported
    Taxonomic identifieri266265 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000001817: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi266265.Bxe_B1315.

    Structurei

    3D structure databases

    ProteinModelPortaliQ13MP2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q13MP2-1 [UniParc]FASTAAdd to Basket

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    MKRFAALYTA LDATTSTHDK LEALTSYFAV AEPEDAAWAS YFLAGGKPRQ    50
    SVPTRLLSEI ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRNSELG 100
    LTQWIEHRVL TLRGAAPEEL RTRLISYWDE LDWGGRFLLT KLIGGGFRVG 150
    VARQLVVRAL AEVAGVDHKR IAQRMVGWTD SQQKPDAARY LRLIAPEATS 200
    DDAQSGAPQH DSDLGLPYPF FLAHPLQADP ATLGDPSQWQ IEWKWDGIRA 250
    QLVKRGGRVW LWSRGEDLIT DRFPEVAALG EALPEGFVID GEILAWEPGA 300
    SAPLPFARLQ PRIARKTLTK KILADSPATL LAYDLLEAHG KDLRMTPLAE 350
    RRAQLDALAT TVDSTLARDL LRVSPLVSAP DWQALAALRD ESRARGVEGL 400
    MVKERESMYG VGRTKASGTW WKWKIDPYAV DAVLVYAQRG HGRRASLYTD 450
    FTFAVWDEAD GVRTLVPFAK AYSGLTDEEM RQVDAIVRKT TIEKFGPVRS 500
    VTPTLVFEIG FEGIQASPRH KSGVAVRFPR MLRWRTDKHI DDADTLPMLK 550
    GFIDDRAG 558
    Length:558
    Mass (Da):62,132
    Last modified:August 22, 2006 - v1
    Checksum:iECC86F00BDE4722F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000271 Genomic DNA. Translation: ABE34647.1.
    RefSeqiWP_011491968.1. NC_007952.1.
    YP_553997.1. NC_007952.1.

    Genome annotation databases

    EnsemblBacteriaiABE34647; ABE34647; Bxe_B1315.
    GeneIDi4008196.
    KEGGibxe:Bxe_B1315.
    PATRICi19338373. VBIBurXen52548_6445.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000271 Genomic DNA. Translation: ABE34647.1 .
    RefSeqi WP_011491968.1. NC_007952.1.
    YP_553997.1. NC_007952.1.

    3D structure databases

    ProteinModelPortali Q13MP2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266265.Bxe_B1315.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE34647 ; ABE34647 ; Bxe_B1315 .
    GeneIDi 4008196.
    KEGGi bxe:Bxe_B1315.
    PATRICi 19338373. VBIBurXen52548_6445.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci BXEN266265:GJII-6336-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: LB400Imported.

    Entry informationi

    Entry nameiQ13MP2_BURXL
    AccessioniPrimary (citable) accession number: Q13MP2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3