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Q13MP2

- Q13MP2_BURXL

UniProt

Q13MP2 - Q13MP2_BURXL

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Protein
Submitted name:

DNA ligase (ATP)

Gene

Bxe_B1315

Organism
Burkholderia xenovorans (strain LB400)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBXEN266265:GJII-6336-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:Bxe_B1315Imported
OrganismiBurkholderia xenovorans (strain LB400)Imported
Taxonomic identifieri266265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001817: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi266265.Bxe_B1315.

Structurei

3D structure databases

ProteinModelPortaliQ13MP2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q13MP2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKRFAALYTA LDATTSTHDK LEALTSYFAV AEPEDAAWAS YFLAGGKPRQ
60 70 80 90 100
SVPTRLLSEI ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRNSELG
110 120 130 140 150
LTQWIEHRVL TLRGAAPEEL RTRLISYWDE LDWGGRFLLT KLIGGGFRVG
160 170 180 190 200
VARQLVVRAL AEVAGVDHKR IAQRMVGWTD SQQKPDAARY LRLIAPEATS
210 220 230 240 250
DDAQSGAPQH DSDLGLPYPF FLAHPLQADP ATLGDPSQWQ IEWKWDGIRA
260 270 280 290 300
QLVKRGGRVW LWSRGEDLIT DRFPEVAALG EALPEGFVID GEILAWEPGA
310 320 330 340 350
SAPLPFARLQ PRIARKTLTK KILADSPATL LAYDLLEAHG KDLRMTPLAE
360 370 380 390 400
RRAQLDALAT TVDSTLARDL LRVSPLVSAP DWQALAALRD ESRARGVEGL
410 420 430 440 450
MVKERESMYG VGRTKASGTW WKWKIDPYAV DAVLVYAQRG HGRRASLYTD
460 470 480 490 500
FTFAVWDEAD GVRTLVPFAK AYSGLTDEEM RQVDAIVRKT TIEKFGPVRS
510 520 530 540 550
VTPTLVFEIG FEGIQASPRH KSGVAVRFPR MLRWRTDKHI DDADTLPMLK

GFIDDRAG
Length:558
Mass (Da):62,132
Last modified:August 22, 2006 - v1
Checksum:iECC86F00BDE4722F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000271 Genomic DNA. Translation: ABE34647.1.
RefSeqiWP_011491968.1. NC_007952.1.
YP_553997.1. NC_007952.1.

Genome annotation databases

EnsemblBacteriaiABE34647; ABE34647; Bxe_B1315.
GeneIDi4008196.
KEGGibxe:Bxe_B1315.
PATRICi19338373. VBIBurXen52548_6445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000271 Genomic DNA. Translation: ABE34647.1 .
RefSeqi WP_011491968.1. NC_007952.1.
YP_553997.1. NC_007952.1.

3D structure databases

ProteinModelPortali Q13MP2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266265.Bxe_B1315.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE34647 ; ABE34647 ; Bxe_B1315 .
GeneIDi 4008196.
KEGGi bxe:Bxe_B1315.
PATRICi 19338373. VBIBurXen52548_6445.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci BXEN266265:GJII-6336-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LB400Imported.

Entry informationi

Entry nameiQ13MP2_BURXL
AccessioniPrimary (citable) accession number: Q13MP2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: October 1, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3