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Protein
Submitted name:

Putative gamma-carboxymuconolactone decarboxylase subunit

Gene

Bxe_B0980

Organism
Burkholderia xenovorans (strain LB400)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBXEN266265:GJII-6671-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative gamma-carboxymuconolactone decarboxylase subunitImported
Gene namesi
ORF Names:Bxe_B0980Imported
OrganismiBurkholderia xenovorans (strain LB400)Imported
Taxonomic identifieri266265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeParaburkholderia
Proteomesi
  • UP000001817 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi266265.Bxe_B0980.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Q0TX-ray1.70A/B/C1-262[»]
ProteinModelPortaliQ13LR5.
SMRiQ13LR5. Positions 1-257.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ13LR5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 10363CMDInterPro annotationAdd
BLAST
Domaini164 – 23572CMDInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105S0D. Bacteria.
ENOG41120E2. LUCA.
HOGENOMiHOG000275575.
OMAiSTIGIHT.
OrthoDBiPOG091H0YCH.

Family and domain databases

Gene3Di1.20.1290.10. 1 hit.
InterProiIPR029032. AhpD-like.
IPR003779. CMD-like.
[Graphical view]
PfamiPF02627. CMD. 2 hits.
[Graphical view]
SUPFAMiSSF69118. SSF69118. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13LR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQTTPQPDP SRLRDELVRL HGKASPEWDS LVRLDPRFVD AYLKFAGVPQ
60 70 80 90 100
RRNHLDDKTR AFIALAADAC ATQLYAPGVA RHIERALSFG ATREELIEVL
110 120 130 140 150
ELVSTIGIHT SNVGVPVLLE VLEEEGLRKG APPLDERRQK LKAEFETNRG
160 170 180 190 200
YWHPTWEGLL ELDPDLFEAY VEFSSVPWRT GVLSPKIKEF MYCAFDASAT
210 220 230 240 250
HLYVPGLKLH IRNALRYGAT AEELMELLEI VSVTGIHGAE LGAPLLEAAL
260
KRSGAAAGEP HA
Length:262
Mass (Da):29,083
Last modified:August 22, 2006 - v1
Checksum:i10C5CAD9B5156FA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000271 Genomic DNA. Translation: ABE34974.1.
RefSeqiWP_011492281.1. NZ_CP008762.1.

Genome annotation databases

EnsemblBacteriaiABE34974; ABE34974; Bxe_B0980.
GeneIDi4008531.
KEGGibxb:DR64_6301.
bxe:Bxe_B0980.
PATRICi19339059. VBIBurXen52548_6788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000271 Genomic DNA. Translation: ABE34974.1.
RefSeqiWP_011492281.1. NZ_CP008762.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2Q0TX-ray1.70A/B/C1-262[»]
ProteinModelPortaliQ13LR5.
SMRiQ13LR5. Positions 1-257.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266265.Bxe_B0980.

Protocols and materials databases

DNASUi4008531.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE34974; ABE34974; Bxe_B0980.
GeneIDi4008531.
KEGGibxb:DR64_6301.
bxe:Bxe_B0980.
PATRICi19339059. VBIBurXen52548_6788.

Phylogenomic databases

eggNOGiENOG4105S0D. Bacteria.
ENOG41120E2. LUCA.
HOGENOMiHOG000275575.
OMAiSTIGIHT.
OrthoDBiPOG091H0YCH.

Enzyme and pathway databases

BioCyciBXEN266265:GJII-6671-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ13LR5.

Family and domain databases

Gene3Di1.20.1290.10. 1 hit.
InterProiIPR029032. AhpD-like.
IPR003779. CMD-like.
[Graphical view]
PfamiPF02627. CMD. 2 hits.
[Graphical view]
SUPFAMiSSF69118. SSF69118. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ13LR5_BURXL
AccessioniPrimary (citable) accession number: Q13LR5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: September 7, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.