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Protein
Submitted name:

Amino acid/amide ABC transporter substrate-binding protein, HAAT family

Gene

Bxe_C0949

Organism
Burkholderia xenovorans (strain LB400)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciBXEN266265:GJII-8602-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Amino acid/amide ABC transporter substrate-binding protein, HAAT familyImported
Gene namesi
ORF Names:Bxe_C0949Imported
OrganismiBurkholderia xenovorans (strain LB400)Imported
Taxonomic identifieri266265 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
Proteomesi
  • UP000001817 Componenti: Chromosome 3

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 399378Sequence analysisPRO_5004182309Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi135 ↔ 395Combined sources

Interactioni

Protein-protein interaction databases

STRINGi266265.Bxe_C0949.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3N0WX-ray1.88A/B22-399[»]
ProteinModelPortaliQ13GG5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ13GG5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini26 – 363338Peripla_BP_6InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105F85. Bacteria.
ENOG410XNWR. LUCA.
HOGENOMiHOG000253828.
OMAiANINIMK.
OrthoDBiEOG6Z99XC.

Family and domain databases

InterProiIPR028081. Leu-bd.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF13458. Peripla_BP_6. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13GG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRGYLLSVL FSAFAMANAS AQSTGQVTLG VLTDMSSVYA DSAGKGSVAA
60 70 80 90 100
VQLAIEDVGG KALGQPVKLV SADYQMKTDV ALSIAREWFD RDGVDAIFDV
110 120 130 140 150
VNSGTALAIN NLVKDKKKLA FITAAAADQI GGTECNGYGI GFLYNFTSIV
160 170 180 190 200
KTVVQAQLAK GYKTWFLMLP DAAYGDLMNA AIRRELTAGG GQIVGSVRFP
210 220 230 240 250
FETQDFSSYL LQAKASGAQL IVSTSGGAAN INIMKQAREF GLPSKTQKVG
260 270 280 290 300
GMIDILTDVK SAGLRVMQGQ EYATSFYWNM DDRTRAFAKR FYAKMGKMPT
310 320 330 340 350
NNQAGGYSAA LQYLKAVNAI GSKDPQKVFA YLKTIKFDDA VTRHGTLRPG
360 370 380 390
GRLVRDMYLV RAKKPEDQKG DWDYYDVVAT IGPEQAFGPL SESRCAMDK
Length:399
Mass (Da):43,023
Last modified:August 22, 2006 - v1
Checksum:i8DC0E856118EC1C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000272 Genomic DNA. Translation: ABE36824.1.

Genome annotation databases

EnsemblBacteriaiABE36824; ABE36824; Bxe_C0949.
KEGGibxb:DR64_7501.
bxe:Bxe_C0949.
PATRICi19342911. VBIBurXen52548_8713.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000272 Genomic DNA. Translation: ABE36824.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3N0WX-ray1.88A/B22-399[»]
ProteinModelPortaliQ13GG5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266265.Bxe_C0949.

Protocols and materials databases

DNASUi4010462.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE36824; ABE36824; Bxe_C0949.
KEGGibxb:DR64_7501.
bxe:Bxe_C0949.
PATRICi19342911. VBIBurXen52548_8713.

Phylogenomic databases

eggNOGiENOG4105F85. Bacteria.
ENOG410XNWR. LUCA.
HOGENOMiHOG000253828.
OMAiANINIMK.
OrthoDBiEOG6Z99XC.

Enzyme and pathway databases

BioCyciBXEN266265:GJII-8602-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ13GG5.

Family and domain databases

InterProiIPR028081. Leu-bd.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF13458. Peripla_BP_6. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LB400Imported.
  2. "Crystal structure of a branched chain amino acid ABC transporter periplasmic ligand-binding protein (Bxe_C0949) from BURKHOLDERIA XENOVORANS LB400 at 1.88 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (MAY-2010) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.88 ANGSTROMS) OF 22-399, DISULFIDE BONDS.

Entry informationi

Entry nameiQ13GG5_BURXL
AccessioniPrimary (citable) accession number: Q13GG5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: March 16, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.