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Protein

Hydroxyacylglutathione hydrolase

Gene

gloB

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.UniRule annotation

Catalytic activityi

S-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.UniRule annotation

Cofactori

Zn2+UniRule annotationNote: Binds 2 Zn2+ ions per subunit.UniRule annotation

Pathwayi: methylglyoxal degradation

This protein is involved in step 2 of the subpathway that synthesizes (R)-lactate from methylglyoxal.UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:
  1. no protein annotated in this organism
  2. Hydroxyacylglutathione hydrolase (gloB)
This subpathway is part of the pathway methylglyoxal degradation, which is itself part of Secondary metabolite metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes (R)-lactate from methylglyoxal, the pathway methylglyoxal degradation and in Secondary metabolite metabolism.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi56 – 561Zinc 1UniRule annotation
Metal bindingi58 – 581Zinc 1UniRule annotation
Metal bindingi60 – 601Zinc 2UniRule annotation
Metal bindingi61 – 611Zinc 2UniRule annotation
Metal bindingi114 – 1141Zinc 1UniRule annotation
Metal bindingi133 – 1331Zinc 1UniRule annotation
Metal bindingi133 – 1331Zinc 2UniRule annotation
Metal bindingi171 – 1711Zinc 2UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-95-MONOMER.
UniPathwayiUPA00619; UER00676.

Names & Taxonomyi

Protein namesi
Recommended name:
Hydroxyacylglutathione hydrolaseUniRule annotation (EC:3.1.2.6UniRule annotation)
Alternative name(s):
Glyoxalase IIUniRule annotation
Short name:
Glx IIUniRule annotation
Gene namesi
Name:gloBUniRule annotation
Ordered Locus Names:RPD_0093
OrganismiRhodopseudomonas palustris (strain BisB5)
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001818 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 255255Hydroxyacylglutathione hydrolasePRO_0000309696Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi316057.RPD_0093.

Structurei

3D structure databases

ProteinModelPortaliQ13F06.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108JMX. Bacteria.
ENOG4111FEZ. LUCA.
HOGENOMiHOG000058041.
KOiK01069.
OMAiGHICYHF.
OrthoDBiPOG091H03YM.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
HAMAPiMF_01374. Glyoxalase_2. 1 hit.
InterProiIPR032282. HAGH_C.
IPR017782. Hydroxyacylglutathione_Hdrlase.
IPR001279. Metallo-B-lactamas.
[Graphical view]
PfamiPF16123. HAGH_C. 1 hit.
PF00753. Lactamase_B. 1 hit.
[Graphical view]
PIRSFiPIRSF005457. Glx. 1 hit.
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.
TIGRFAMsiTIGR03413. GSH_gloB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13F06-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAADIRIVPC LTDNFGYLIH DPSSGATASI DAPEAAPLIA ALEKEGWKLT
60 70 80 90 100
DILVTHHHGD HVGGVAELKK KYQCRVVAPH DANAKIADID LRVEEGDVVR
110 120 130 140 150
VGGLSARVLE TPGHTLDHIS YVFDDDRALF AADTLFSIGC GRVFEGTYPM
160 170 180 190 200
MWESLLKLRE LPDDFKLYCG HEYTASNVKF ALTIEPDNAA LQARAKQVEQ
210 220 230 240 250
QRAAGQPTIP VTLGEEKQAN LFLRADVPSV AAAVGLPGES AADVFGELRE

RKNNS
Length:255
Mass (Da):27,657
Last modified:October 31, 2006 - v1
Checksum:i3FED561F9DE328C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37333.1.
RefSeqiWP_011500526.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE37333; ABE37333; RPD_0093.
KEGGirpd:RPD_0093.
PATRICi23274985. VBIRhoPal120395_0091.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37333.1.
RefSeqiWP_011500526.1. NC_007958.1.

3D structure databases

ProteinModelPortaliQ13F06.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316057.RPD_0093.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE37333; ABE37333; RPD_0093.
KEGGirpd:RPD_0093.
PATRICi23274985. VBIRhoPal120395_0091.

Phylogenomic databases

eggNOGiENOG4108JMX. Bacteria.
ENOG4111FEZ. LUCA.
HOGENOMiHOG000058041.
KOiK01069.
OMAiGHICYHF.
OrthoDBiPOG091H03YM.

Enzyme and pathway databases

UniPathwayiUPA00619; UER00676.
BioCyciRPAL316057:GHDC-95-MONOMER.

Family and domain databases

Gene3Di3.60.15.10. 1 hit.
HAMAPiMF_01374. Glyoxalase_2. 1 hit.
InterProiIPR032282. HAGH_C.
IPR017782. Hydroxyacylglutathione_Hdrlase.
IPR001279. Metallo-B-lactamas.
[Graphical view]
PfamiPF16123. HAGH_C. 1 hit.
PF00753. Lactamase_B. 1 hit.
[Graphical view]
PIRSFiPIRSF005457. Glx. 1 hit.
SMARTiSM00849. Lactamase_B. 1 hit.
[Graphical view]
SUPFAMiSSF56281. SSF56281. 1 hit.
TIGRFAMsiTIGR03413. GSH_gloB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiGLO2_RHOPS
AccessioniPrimary (citable) accession number: Q13F06
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: October 31, 2006
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.