Q13EY3 (Q13EY3_RHOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase HAMAP MF_00277
Short name=PII uridylyl-transferase HAMAP MF_00277
EC=2.7.7.59 HAMAP MF_00277

Alternative name(s):
UTase HAMAP MF_00277
Uridylyl-removing enzyme HAMAP MF_00277

Gene names

Name:	glnD HAMAP MF_00277
Ordered Locus Names:	RPD_0116

Organism

Rhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]

Taxonomic identifier

316057 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	933 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein By similarity. HAMAP MF_00277 SAAS SAAS002912
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP MF_00277 SAAS SAAS002912
Sequence similarities	Belongs to the glnD family. HAMAP MF_00277

Ontologies

Keywords
Biological process	Nitrogen fixation HAMAP MF_00277
Molecular function	Nucleotidyltransferase HAMAP MF_00277 SAAS SAAS002912 EMBL ABE37356.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q13EY3 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 4FF353DD6CB3918B	FASTA	933	105,371
	10 20 30 40 50 60 MDKVATPPHR PAGDERFDTQ RITAEIAVLA AQHGGNDQAF RNALAQLMKA ELAKARAEAE 70 80 90 100 110 120 AQLLRDRHGR RCAERLCFVK DEIIRLLFMA ATKYLYNSPT PSSSERMSVV ATGGYGRGLM 130 140 150 160 170 180 APESDIDLLF ILPYKQTAWG EQVAEVVLYS LWDIGLKVGH ATRSVDECIR QARADMTIRT 190 200 210 220 230 240 AILETRFLTG DKALYAELVE RFDKEVVEGT AAEFVTAKLA EREERHRRSG QSRYLVEPNV 250 260 270 280 290 300 KDGKGGLRDL HTLFWIAKYV YRVRETSELL ERGVFDAIEF RTFRRCEDFL WSVRCNLHFL 310 320 330 340 350 360 TRRAEERLSF DLQREIGVRL GYTSHPGMQD VERFMKHYFL IAKEVGNLTA ILCAKLEDQQ 370 380 390 400 410 420 AKPAPALSRM MARLRPGATR RRVPESDDFV IDNNRINLAA PDVFKHDPVN LIRIFRLAQK 430 440 450 460 470 480 NSLAFHPDAM RTVTRSLALI NAQLRDDPEA NRLFIEILTS DNSEPVLRRM NETGVLGRFI 490 500 510 520 530 540 RAFGRIVSMM QFNMYHSYTV DEHLLRCVGN LQEIERGGND EFMLSSDLTR RIRPDHRAVL 550 560 570 580 590 600 YVAVLLHDIA KGQPEDHSTA GAKVARRLCP RFGFNAADTE LIAWLIEKHL VMSTVAQSRD 610 620 630 640 650 660 LSDRKTIENF AAVVESVEQM KLLTILTTAD IRGVGPGVWN GWKAQLLRTL YYETEPVLTG 670 680 690 700 710 720 GFSEVNRAER IRAAQAEFRA AFTEWPEAEL DAYVARHYPA YWLKVELARK LRHARFLRAS 730 740 750 760 770 780 EQAGNKLAVN VGFDEARGVT ELTILAVDHP WLLSIIAGAC ASAGANIVDA QIYTTTDGRA 790 800 810 820 830 840 LDTISIRREY DRDEDEGRRA TRIGEIIEEV LEGKLRLPEA VARRATSSKT KLRAFVVEPE 850 860 870 880 890 900 ISINNNWSDR YTVIEVSGLD RPGLLYQLTT AISKLNLNIA SAHVATFGER ARDVFYVTDL 910 920 930 LGAQITAPTR QAAIKRALVH LLANGDAEQK PAA

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB5." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000283 Genomic DNA. Translation: ABE37356.1.
RefSeq	YP_567257.1. NC_007958.1.
3D structure databases
ProteinModelPortal	Q13EY3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q13EY3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4020572.
GenomeReviews	Gene locus RPD_0116 in contig CP000283_GR.
KEGG	rpd:RPD_0116.
PATRIC	23275039. VBIRhoPal120395_0118.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HBG687872.
OMA	MQHDLFH.
ProtClustDB	PRK05092.
Enzyme and pathway databases
BioCyc	RPAL316057:RPD_0116-MONOMER.
Family and domain databases
HAMAP	MF_00277. PII_uridylyl_transf. [Tree]
InterPro	IPR002912. ACT-bd. IPR010043. GlnD_Uridyltrans. IPR023279. HD. IPR003607. Metal-dep_PHydrolase_HD_dom. IPR006674. Metal-dep_PHydrolase_HD_sub. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
Gene3D	G3DSA:1.10.3210.10. HD. 1 hit.
KO	K00990.
PANTHER	PTHR13734:SF1. GlnD_Uridyltrans. 1 hit.
Pfam	PF01842. ACT. 2 hits. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q13EY3_RHOPS

Accession

Primary (citable) accession number: Q13EY3

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)