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Q13EA7 (GLGA_RHOPS) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:RPD_0344
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Glycogen synthase HAMAP-Rule MF_00484
PRO_1000014381

Sites

Binding site181ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q13EA7 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 0FED0A5F838C375C

FASTA48251,067
        10         20         30         40         50         60 
MTTLTALSVA SEIFPLIKTG GLADVTGALP AAVKAHGVAM RTLVPGYPAV LGGIEDPQQV 

        70         80         90        100        110        120 
HSFTEFFGGS ARLLAARCDE LELLVLDAPH LYVRPGNPYV GPDAKDWPDN ALRFAALAQA 

       130        140        150        160        170        180 
GAWIGQGLLP GYAPDILHAH DWQTGLLPAY LRYSGRPAPK CVFTIHNLAY QGQFPSELLA 

       190        200        210        220        230        240 
RIGLPERAFS LDGVEYYGGI GYLKAGLQLA DRITTVSPSY ALEIQGSEAG MGLEGLLRLR 

       250        260        270        280        290        300 
AGQLSGILNG VDTKVWDPSA DQLIPATYDV ETIGARARNK QALQARFGLR AESGALLFGV 

       310        320        330        340        350        360 
ISRLSWQKGL DMLLEVLPGM LADGAQLALL GAGDAPLEAG FRDAALKYPG QVGAVIGYDE 

       370        380        390        400        410        420 
ALAHQIQAGA DALLVPSRFE PCGLTQLCAL RYGAVPVVAR VGGLADTVVD ANEMAIATGV 

       430        440        450        460        470        480 
ATGVQFSPVT ADMLTAALTK TRALYADHAT WRNLQINGMT TDVSWKNPAQ HYAKLYRELV 


DA 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000283 Genomic DNA. Translation: ABE37582.1.
RefSeqYP_567483.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ13EA7.
SMRQ13EA7. Positions 6-480.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316057.RPD_0344.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE37582; ABE37582; RPD_0344.
GeneID4020804.
KEGGrpd:RPD_0344.
PATRIC23275521. VBIRhoPal120395_0355.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK14099.

Enzyme and pathway databases

BioCycRPAL316057:GHDC-350-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_RHOPS
AccessionPrimary (citable) accession number: Q13EA7
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 22, 2006
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways