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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

RPD_0462

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-475-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:RPD_0462Imported
OrganismiRhodopseudomonas palustris (strain BisB5)Imported
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316057.RPD_0462.

Structurei

3D structure databases

ProteinModelPortaliQ13DY9.
SMRiQ13DY9. Positions 1-429.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiAHFPFIA.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13DY9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPDDIAGFY AKRSDLNLDD YIELDFDFEC AGDPREAAAH LCSEQSTAQW
60 70 80 90 100
RRVGVDEDFR PRFAAKVLEL HAEPRPSGFS TPVECAVRGE VHACRVTIAH
110 120 130 140 150
PHGNFGPKIP NLLSAVCGEG VFFSPGIPLI RLQDIRFPDS YLAAFAGPQF
160 170 180 190 200
GVAGLRERLK AFDRPIFFGV IKPNIGLSAE PFAELGYQSW LGGLDIAKDD
210 220 230 240 250
EMLADVDWCP LAERAALLGD ACRRAEAETG VPKIYLANIT DEVDRLIELH
260 270 280 290 300
DLAVSNGAGA LLVNAMPVGL SAVRMLRKHA TVPLIAHFPF IAAFSRLANY
310 320 330 340 350
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVMDCVR ACLEPMGPIK
360 370 380 390 400
PCLPVPGGSD SAATLESVYR KVGCADFGFV PGRGVFGHPM GPAAGAASIR
410 420 430
QAWDAIASGI AVSDHAARHP ELAAALRAFG GR
Length:432
Mass (Da):46,552
Last modified:October 31, 2006 - v1
Checksum:i4177FD2ADB0C5F2C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37700.1.
RefSeqiWP_011500888.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE37700; ABE37700; RPD_0462.
KEGGirpd:RPD_0462.
PATRICi23275775. VBIRhoPal120395_0475.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37700.1.
RefSeqiWP_011500888.1. NC_007958.1.

3D structure databases

ProteinModelPortaliQ13DY9.
SMRiQ13DY9. Positions 1-429.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316057.RPD_0462.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE37700; ABE37700; RPD_0462.
KEGGirpd:RPD_0462.
PATRICi23275775. VBIRhoPal120395_0475.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiAHFPFIA.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-475-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB5Imported.

Entry informationi

Entry nameiQ13DY9_RHOPS
AccessioniPrimary (citable) accession number: Q13DY9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.