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Q13DY9

- Q13DY9_RHOPS

UniProt

Q13DY9 - Q13DY9_RHOPS

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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

RPD_0462

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-475-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:RPD_0462Imported
OrganismiRhodopseudomonas palustris (strain BisB5)Imported
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001818: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316057.RPD_0462.

Structurei

3D structure databases

ProteinModelPortaliQ13DY9.
SMRiQ13DY9. Positions 1-429.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFECAGDP.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13DY9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MTPDDIAGFY AKRSDLNLDD YIELDFDFEC AGDPREAAAH LCSEQSTAQW
60 70 80 90 100
RRVGVDEDFR PRFAAKVLEL HAEPRPSGFS TPVECAVRGE VHACRVTIAH
110 120 130 140 150
PHGNFGPKIP NLLSAVCGEG VFFSPGIPLI RLQDIRFPDS YLAAFAGPQF
160 170 180 190 200
GVAGLRERLK AFDRPIFFGV IKPNIGLSAE PFAELGYQSW LGGLDIAKDD
210 220 230 240 250
EMLADVDWCP LAERAALLGD ACRRAEAETG VPKIYLANIT DEVDRLIELH
260 270 280 290 300
DLAVSNGAGA LLVNAMPVGL SAVRMLRKHA TVPLIAHFPF IAAFSRLANY
310 320 330 340 350
GIHSRVMTRL QRLAGFDVVI MPGFGPRMMT PEHEVMDCVR ACLEPMGPIK
360 370 380 390 400
PCLPVPGGSD SAATLESVYR KVGCADFGFV PGRGVFGHPM GPAAGAASIR
410 420 430
QAWDAIASGI AVSDHAARHP ELAAALRAFG GR
Length:432
Mass (Da):46,552
Last modified:October 31, 2006 - v1
Checksum:i4177FD2ADB0C5F2C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37700.1.
RefSeqiYP_567601.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE37700; ABE37700; RPD_0462.
GeneIDi4020929.
KEGGirpd:RPD_0462.
PATRICi23275775. VBIRhoPal120395_0475.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE37700.1 .
RefSeqi YP_567601.1. NC_007958.1.

3D structure databases

ProteinModelPortali Q13DY9.
SMRi Q13DY9. Positions 1-429.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316057.RPD_0462.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE37700 ; ABE37700 ; RPD_0462 .
GeneIDi 4020929.
KEGGi rpd:RPD_0462.
PATRICi 23275775. VBIRhoPal120395_0475.

Phylogenomic databases

eggNOGi COG1850.
HOGENOMi HOG000230831.
KOi K01601.
OMAi FECAGDP.
OrthoDBi EOG62K1SK.

Enzyme and pathway databases

BioCyci RPAL316057:GHDC-475-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB5Imported.

Entry informationi

Entry nameiQ13DY9_RHOPS
AccessioniPrimary (citable) accession number: Q13DY9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: October 1, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3