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Protein
Submitted name:

ATP dependent DNA ligase

Gene

RPD_0793

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciRPAL316057:G1G68-814-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:RPD_0793Imported
OrganismiRhodopseudomonas palustris (strain BisB5)Imported
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316057.RPD_0793

Structurei

3D structure databases

ProteinModelPortaliQ13D08
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini278 – 482DNA_LIGASE_A3InterPro annotationAdd BLAST205
Domaini503 – 600DNA_ligase_A_CInterPro annotationAdd BLAST98

Phylogenomic databases

eggNOGiENOG4107QIM Bacteria
COG1793 LUCA
HOGENOMiHOG000036007
KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Family and domain databases

InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit

Sequencei

Sequence statusi: Complete.

Q13D08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRFAELLDR LAYEPGRNNK LRLITNYFRA TEDPDRGYAL AALTGALSFR
60 70 80 90 100
HAKPGLIREL IAARTDPVLF GLSYDYVGDL SETVALMWPT PRNTAVSTPA
110 120 130 140 150
GGASSPPPGS ASSPPPCGEG SGVGGHSGTP SSWHPHPNPL PQAGEGARSA
160 170 180 190 200
WGEDRDSELS AATSPGHNNP PPPSLTEIVT TLHSLGKAEL PAQLTRWLDE
210 220 230 240 250
LDETGRWALL KLVTGGLRIG VSARLAKTAA AALGDKDPHD VELMWPGLDA
260 270 280 290 300
PYLDLFAWLE GRGPQPVNRD PAPFRPVMLA HALEDTDFAA MNAADYIAEW
310 320 330 340 350
KWDGIRVQAV SGVGDDGDTI VRLYSRSGED ITRSFPDLLP SLRLPGAIDG
360 370 380 390 400
ELLVLRESRV QSFNVLQQRL NRKSVTPKLI KEYPIHLRAY DLLGEGDDDL
410 420 430 440 450
RTLTFAERRA RLEAFVARLD EPKIDLSPMV TFADWDDLHA ARRDPASAGA
460 470 480 490 500
GLDADAVEGV MLKRRDAPYL PGRPKGQWWK WKHDPHIIDA VLMYAQRGHG
510 520 530 540 550
KRSSYYSDYT FGVWTAGDGG DQLVPVGKAY FGFTDEELLQ IDRFVRRNTT
560 570 580 590 600
EKFGPVRHVV HEPDQGLVLE VAFEGLQRSP RHKSGVAMRF PRISRLRWDK
610 620 630
PPRDADRLET LERMLKADGA IPSAAPARGH
Length:630
Mass (Da):69,343
Last modified:October 31, 2006 - v1
Checksum:iC0A0781EE2AB87E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA Translation: ABE38031.1
RefSeqiWP_011501218.1, NC_007958.1

Genome annotation databases

EnsemblBacteriaiABE38031; ABE38031; RPD_0793
KEGGirpd:RPD_0793

Similar proteinsi

Entry informationi

Entry nameiQ13D08_RHOPS
AccessioniPrimary (citable) accession number: Q13D08
Entry historyiIntegrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: March 28, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health