Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q13CW3 (Q13CW3_RHOPS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
5-aminolevulinate synthase EMBL ABE38076.1
EC=2.3.1.37 EMBL ABE38076.1
Gene names
Ordered Locus Names:RPD_0838
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU003693

Sequence similarities

Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693

Sequences

Sequence LengthMass (Da)Tools
Q13CW3 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: AE1F4C587EC7F99A

FASTA40944,613
        10         20         30         40         50         60 
MQYNKFFEDA VARLHDERRY RVFADLERIA GRFPYAVWHS QTGPRDVVIW CSNDYLGMGQ 

        70         80         90        100        110        120 
HPKVVGAMVE TTTRIGTGAG GTRNIAGTHH PLVQLEAEIA DLHGKEAALL FTSGYVSNQT 

       130        140        150        160        170        180 
GLSTLGKLIP NCLILSDALN HNSMIEGIRQ SGCERVVWRH NDTAHLEELL IAAGPDRPKL 

       190        200        210        220        230        240 
IAFESLYSMD GDIAPLSKIC DLAEKYNAMT YCDEVHAVGM YGPRGAGVAE RDGVMHRIDI 

       250        260        270        280        290        300 
MEATLAKAFG CLGGYIAGKA EVIDAVRSYA PGFIFTTALP PPICAAATAA IKHLKSSSWE 

       310        320        330        340        350        360 
RERHQDRAAR VKAVLNNAGI PVMPTDTHIV PVFVGDAEKC KKASDLLLEQ HGIYIQPINY 

       370        380        390        400 
PTVARGLERL RITPSPYHDD KLIDALAEAL VQVWGQLGLP LGAKAIAAE

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000283 Genomic DNA. Translation: ABE38076.1.
RefSeqYP_567977.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ13CW3.
SMRQ13CW3. Positions 2-394.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ13CW3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4021312.
GenomeReviewsGene locus RPD_0838 in contig CP000283_GR.
KEGGrpd:RPD_0838.
PATRIC23276566. VBIRhoPal120395_0866.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0156.
HOGENOMHBG649839.
OMAHLKESNE.
ProtClustDBPRK09064.

Enzyme and pathway databases

BioCycRPAL316057:RPD_0838-MONOMER.

Family and domain databases

InterProIPR010961. 4pyrrol_synth_NH2levulA_synth.
IPR001917. Aminotrans_II_pyridoxalP_BS.
IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KOK00643.
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01821. 5aminolev_synth. 1 hit.
PROSITEPS00599. AA_TRANSFER_CLASS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ13CW3_RHOPS
AccessionPrimary (citable) accession number: Q13CW3
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info