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Q13AV4 (Q13AV4_RHOPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABE38785.1
Gene names
Ordered Locus Names:RPD_1548 EMBL ABE38785.1
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP] EMBL ABE38785.1
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length120 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABE38785.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q13AV4 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: C013683DBC1B1426

FASTA12013,850
        10         20         30         40         50         60 
MTTPIKDYQS RISDPNSRKL GTFSYLPPMD AEQLRKQINY IVNQGWTAAI EHTEPSHATG 

        70         80         90        100        110        120 
YYWYMWKLPM FGETDVDRVL TEIEACRAAN PNHHVRLIGY DNVVQTQGTS MLVYRAPIEV 

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References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5 EMBL ABE38785.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000283 Genomic DNA. Translation: ABE38785.1.
RefSeqYP_568686.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ13AV4.
SMRQ13AV4. Positions 15-116.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316057.RPD_1548.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE38785; ABE38785; RPD_1548.
GeneID4022028.
KEGGrpd:RPD_1548.
PATRIC23278047. VBIRhoPal120395_1601.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141332.
KOK01602.
OMAWNPAIEH.
OrthoDBEOG6G20PM.
ProtClustDBCLSK2397934.

Enzyme and pathway databases

BioCycRPAL316057:GHDC-1574-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ13AV4_RHOPS
AccessionPrimary (citable) accession number: Q13AV4
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)