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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase small subunit

Gene

RPD_1548

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-1574-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:RPD_1548Imported
OrganismiRhodopseudomonas palustris (strain BisB5)Imported
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001818: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316057.RPD_1548.

Structurei

3D structure databases

ProteinModelPortaliQ13AV4.
SMRiQ13AV4. Positions 15-116.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiMVGYDAY.
OrthoDBiEOG6G20PM.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q13AV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTPIKDYQS RISDPNSRKL GTFSYLPPMD AEQLRKQINY IVNQGWTAAI
60 70 80 90 100
EHTEPSHATG YYWYMWKLPM FGETDVDRVL TEIEACRAAN PNHHVRLIGY
110 120
DNVVQTQGTS MLVYRAPIEV
Length:120
Mass (Da):13,850
Last modified:October 31, 2006 - v1
Checksum:iC013683DBC1B1426
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE38785.1.
RefSeqiYP_568686.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE38785; ABE38785; RPD_1548.
GeneIDi4022028.
KEGGirpd:RPD_1548.
PATRICi23278047. VBIRhoPal120395_1601.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE38785.1.
RefSeqiYP_568686.1. NC_007958.1.

3D structure databases

ProteinModelPortaliQ13AV4.
SMRiQ13AV4. Positions 15-116.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316057.RPD_1548.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE38785; ABE38785; RPD_1548.
GeneIDi4022028.
KEGGirpd:RPD_1548.
PATRICi23278047. VBIRhoPal120395_1601.

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141332.
KOiK01602.
OMAiMVGYDAY.
OrthoDBiEOG6G20PM.

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-1574-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB5Imported.

Entry informationi

Entry nameiQ13AV4_RHOPS
AccessioniPrimary (citable) accession number: Q13AV4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: March 4, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.