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Q13AQ9 (Q13AQ9_RHOPS) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.22 EMBL ABE38830.1
Gene names
Ordered Locus Names:RPD_1593
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length436 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q13AQ9 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: B253986D40B1D88F

FASTA43647,058
        10         20         30         40         50         60 
MMRIAMIGTG YVGLVSGACF ADFGHHVVCV DKDADKIAAL HRGEIPIYEP GLDELVAANV 

        70         80         90        100        110        120 
KAGRLGFTTD LSVPVGEAEA VFIAVGTPSR RGDGHADLSY VYAAAREIAA ALKDFTVVIT 

       130        140        150        160        170        180 
KSTVPVGTGD EVERLIRETN PEADAAVASN PEFLREGAAI RDFKFPDRIV IGTADERARK 

       190        200        210        220        230        240 
VLGEIYRPLS LNQGPLMYTE RRTAELIKYA ANAFLATKIT FINEMADLAE KVGADVQDVA 

       250        260        270        280        290        300 
RGIGMDNRIG AKFLHAGPGF GGSCFPKDTR ALVKIGLDHE APLRIVEAVL AVNENRKRAM 

       310        320        330        340        350        360 
SRKVLHALGG SLRGKTVAVL GLTFKPDTDD MREAPSIPLV TGLLDMGATV RAFDPAGMAQ 

       370        380        390        400        410        420 
AREELPDITY CADAYDCAQG ADALVIVTEW VQFRALDLAR LKQTLKQPVI VDLRNVYRPE 

       430 
QMAEHGFVYH GIGRPS 

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References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000283 Genomic DNA. Translation: ABE38830.1.
RefSeqYP_568731.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ13AQ9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ13AQ9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4022073.
GenomeReviewsGene locus RPD_1593 in contig CP000283_GR.
KEGGrpd:RPD_1593.
PATRIC23278137. VBIRhoPal120395_1646.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1004.
HOGENOMHBG400967.
OMAHADVQFI.
ProtClustDBCLSK910809.

Enzyme and pathway databases

BioCycRPAL316057:RPD_1593-MONOMER.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR021157. Cyt_c1_TM_anchor_C.
IPR016040. NAD(P)-bd_dom.
IPR017476. Nucleotide_sugar_DH.
IPR014027. UDP-Glc/GDP-Man_DH_C.
IPR014026. UDP-Glc/GDP-Man_DH_dimer.
IPR001732. UDP-Glc/GDP-Man_DH_N.
[Graphical view]
Gene3DG3DSA:1.20.5.100. Cyt_c1_TM_anchor_C. 1 hit.
G3DSA:3.40.50.720. NAD(P)-bd. 2 hits.
KOK00012.
PfamPF00984. UDPG_MGDP_dh. 1 hit.
PF03720. UDPG_MGDP_dh_C. 1 hit.
PF03721. UDPG_MGDP_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMARTSM00984. UDPG_MGDP_dh_C. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMsTIGR03026. NDP-sugDHase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ13AQ9_RHOPS
AccessionPrimary (citable) accession number: Q13AQ9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)