Q13AP0 (Q13AP0_RHOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Phosphoheptose isomerase EMBL ABE38849.1
EC=5.3.1.- EMBL ABE38849.1

Gene names

Ordered Locus Names:

RPD_1612

Organism

Rhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]

Taxonomic identifier

316057 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	195 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate By similarity. SAAS SAAS020620
Catalytic activity	D-sedoheptulose 7-phosphate = D-glycero-D-manno-heptose 7-phosphate. SAAS SAAS020620
Cofactor	Binds 1 zinc ion per subunit By similarity. SAAS SAAS020620
Pathway	Carbohydrate biosynthesis; D-glycero-D-manno-heptose 7-phosphate biosynthesis; D-glycero-alpha-D-manno-heptose 7-phosphate and D-glycero-beta-D-manno-heptose 7-phosphate from sedoheptulose 7-phosphate: step 1/1. SAAS SAAS020620
Subcellular location	Cytoplasm By similarity SAAS SAAS020620.
Sequence similarities	Contains 1 SIS domain. SAAS SAAS020620

Ontologies

Keywords
Biological process	Carbohydrate metabolism SAAS SAAS020620
Cellular component	Cytoplasm SAAS SAAS020620
Ligand	Metal-binding SAAS SAAS020620 Zinc SAAS SAAS020620
Molecular function	Isomerase SAAS SAAS020620 EMBL ABE38849.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	D-sedoheptulose 7-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW sugar binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q13AP0 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 4372BF88EBF94613	FASTA	195	20,157
	10 20 30 40 50 60 MSQDRIAAHF HNSLVAMTAA VGDEAVLSAS RAIAAASIAA LRDGRKILIA GNGGSAADAQ 70 80 90 100 110 120 HIAAEIIGRY KQDRPAWPAI ALTTDTSALT AIANDYGFDQ VFARQVEGLG QRGDVFIGIT 130 140 150 160 170 180 TSGRSPNILA ALKMARERGL VTIGMTGPSG VSMAAWCDHL LVAPGAETAL VQQIHLMAAH 190 AICDEIESVL GATKA

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB5." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000283 Genomic DNA. Translation: ABE38849.1.
RefSeq	YP_568750.1. NC_007958.1.
3D structure databases
ProteinModelPortal	Q13AP0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q13AP0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4022092.
GenomeReviews	Gene locus RPD_1612 in contig CP000283_GR.
KEGG	rpd:RPD_1612.
PATRIC	23278167. VBIRhoPal120395_1661.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0279.
HOGENOM	HBG671955.
OMA	HITIIHI.
ProtClustDB	PRK13937.
Enzyme and pathway databases
BioCyc	RPAL316057:RPD_1612-MONOMER.
Family and domain databases
HAMAP	MF_00067. GmhA. [Tree]
InterPro	IPR020620. Phosphoheptose_isomerase. IPR001347. SIS. [Graphical view]
KO	K03271.
Pfam	PF01380. SIS. 1 hit. [Graphical view]
PROSITE	PS51464. SIS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q13AP0_RHOPS

Accession

Primary (citable) accession number: Q13AP0

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)