Reviewed, UniProtKB/Swiss-Prot Q139H7 (FCTA_RHOPS)

Names and origin

Protein names

Recommended name:
    Formyl-coenzyme A transferase
      Short name=Formyl-CoA transferase
    EC=2.8.3.16

Gene names

Name:	frc
Ordered Locus Names:	RPD_2027

Organism

Rhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]

Taxonomic identifier

316057 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	425 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate By similarity.
Catalytic activity	Formyl-CoA + oxalate = formate + oxalyl-CoA. HAMAP MF_00742
Pathway	Metabolic intermediate degradation; oxalate degradation; CO(2) and formate from oxalate: step 1/2. HAMAP MF_00742
Sequence similarities	Belongs to the caiB/baiF CoA-transferase family.

Ontologies

Keywords
Molecular function	Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	formyl-CoA transferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 425	425	Formyl-coenzyme A transferase HAMAP MF_00742		PRO_0000300992
Sites
	Active site	168	1	Nucleophile By similarity
	Binding site	96	1	Coenzyme A By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q139H7-1 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: FDF3A26CBF70A037	FASTA	425	46,463
	10 20 30 40 50 60 MTKALDGVRI LDFTHVQSGP TCTQLLAWFG ADVIKVERPG TGDITRGQLQ DIPKVDSLYF 70 80 90 100 110 120 TMLNHNKRSI TLDTKNPKGK EVLTALIRSC DVLVENFGPG VLDRMGFTWD KIQEINPRMI 130 140 150 160 170 180 VASIKGFGPG PYEDCKVYEN VAQCTGGAAS TTGFRDGPPL VTGAQIGDSG TGLHLALGIV 190 200 210 220 230 240 TALYQRQHTG RGQRVTAAMQ DGVLNLSRVK LRDQQRLAHG PLKEYSQFGE GIPFGDAVPR 250 260 270 280 290 300 AGNDSGGGQP GRILKCKGWE TDPNAYIYFI TQAPVWEKIC DVIGETGWKT HPDYATPPAR 310 320 330 340 350 360 LKHLNDIFAR IEQWTMTKTK FEAMDILNSD DIPCGPILSM KELAEDPSLR ATGTVVEVDH 370 380 390 400 410 420 PTRGKYLSVG NPIKLSDSPT EVKRSPLLGE HTDEVLREVL GFNDHQIAEI HDSGALAPPR KQAAE

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB5." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000283 Genomic DNA. Translation: ABE39262.1.
RefSeq	YP_569163.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q139H7.
Genome annotation databases
GeneID	4022509.
GenomeReviews	Gene locus RPD_2027 in contig CP000283_GR.
KEGG	rpd:RPD_2027.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q139H7.
OMA	NPKGKEV.
Enzyme and pathway databases
BioCyc	RPAL316057:RPD_2027-MON.
Family and domain databases
HAMAP	MF_00742. [Tree]
InterPro	IPR003673. CoA-Trfase_fam_III. IPR017659. Formyl-CoA_transferase. [Graphical view]
Gene3D	G3DSA:3.40.50.10540. CoA-Trfase_fam_III. 1 hit.
PANTHER	PTHR11837. CAIB_BAIF. 1 hit.
Pfam	PF02515. CoA_transf_3. 1 hit. [Graphical view]
TIGRFAMs	TIGR03253. oxalate_frc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

FCTA_RHOPS

Accession

Primary (citable) accession number: Q139H7

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 11, 2007
Last sequence update:	October 31, 2006
Last modified:	November 3, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)