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Q139H7 (FCTA_RHOPS) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Formyl-coenzyme A transferase
Short name=Formyl-CoA transferase
EC=2.8.3.16
Gene names
Name:frc
Ordered Locus Names:RPD_2027
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate By similarity. HAMAP MF_00742

Catalytic activity

Formyl-CoA + oxalate = formate + oxalyl-CoA. HAMAP MF_00742

Pathway

Metabolic intermediate degradation; oxalate degradation; CO(2) and formate from oxalate: step 1/2. HAMAP MF_00742

Sequence similarities

Belongs to the CaiB/BaiF CoA-transferase family.

Ontologies

Keywords
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionformyl-CoA transferase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 425425Formyl-coenzyme A transferase HAMAP MF_00742
PRO_0000300992

Sites

Active site1681Nucleophile By similarity
Binding site961Coenzyme A By similarity

Sequences

Sequence LengthMass (Da)Tools
Q139H7 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: FDF3A26CBF70A037

FASTA42546,463
        10         20         30         40         50         60 
MTKALDGVRI LDFTHVQSGP TCTQLLAWFG ADVIKVERPG TGDITRGQLQ DIPKVDSLYF 

        70         80         90        100        110        120 
TMLNHNKRSI TLDTKNPKGK EVLTALIRSC DVLVENFGPG VLDRMGFTWD KIQEINPRMI 

       130        140        150        160        170        180 
VASIKGFGPG PYEDCKVYEN VAQCTGGAAS TTGFRDGPPL VTGAQIGDSG TGLHLALGIV 

       190        200        210        220        230        240 
TALYQRQHTG RGQRVTAAMQ DGVLNLSRVK LRDQQRLAHG PLKEYSQFGE GIPFGDAVPR 

       250        260        270        280        290        300 
AGNDSGGGQP GRILKCKGWE TDPNAYIYFI TQAPVWEKIC DVIGETGWKT HPDYATPPAR 

       310        320        330        340        350        360 
LKHLNDIFAR IEQWTMTKTK FEAMDILNSD DIPCGPILSM KELAEDPSLR ATGTVVEVDH 

       370        380        390        400        410        420 
PTRGKYLSVG NPIKLSDSPT EVKRSPLLGE HTDEVLREVL GFNDHQIAEI HDSGALAPPR 


KQAAE

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000283 Genomic DNA. Translation: ABE39262.1.
RefSeqYP_569163.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ139H7.
SMRQ139H7. Positions 1-416.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ139H7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4022509.
GenomeReviewsGene locus RPD_2027 in contig CP000283_GR.
KEGGrpd:RPD_2027.
PATRIC23279033. VBIRhoPal120395_2094.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1804.
HOGENOMHBG659028.
OMAQFGEGIP.
ProtClustDBPRK05398.

Enzyme and pathway databases

BioCycRPAL316057:RPD_2027-MONOMER.

Family and domain databases

HAMAPMF_00742. Formyl-CoA_transfer.
[Tree]
InterProIPR003673. CoA-Trfase_fam_III.
IPR023606. CoA-Trfase_III_dom.
IPR017659. Formyl-CoA_transferase.
[Graphical view]
Gene3DG3DSA:3.40.50.10540. CoA-Trfase_fam_III. 1 hit.
KOK07749.
PANTHERPTHR11837. CAIB_BAIF. 1 hit.
PfamPF02515. CoA_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF89796. CoA-Trfase_fam_III. 1 hit.
TIGRFAMsTIGR03253. Oxalate_frc. 1 hit.
ProtoNetSearch...

Entry information

Entry nameFCTA_RHOPS
AccessionPrimary (citable) accession number: Q139H7
Entry history
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: October 31, 2006
Last modified: January 25, 2012
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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