Q138M1 (Q138M1_RHOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit EMBL ABE39468.1
EC=4.1.1.39 EMBL ABE39468.1

Gene names

Ordered Locus Names:

RPD_2233

Organism

Rhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP] EMBL ABE39468.1

Taxonomic identifier

316057 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas › Rhodopseudomonas palustris

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ABE39468.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q138M1 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 73B642A458DA83A6	FASTA	367	38,335
	10 20 30 40 50 60 MTDDRFIATY QVTSEPARIA ERAQALAIEQ SVECPLEAIG DPWVRDAVLG RVAGIDEIAE 70 80 90 100 110 120 GRYAVRIALA SATAPAEPGQ LINMLFGNAS IQPDVALTDV ELPPLYLKAF GGPKLGSDGI 130 140 150 160 170 180 RALAGAHGRA LTASALKPQG LSPQALAAIA GRLAAGGVDL IKDDHGLADQ AYSPFAARIA 190 200 210 220 230 240 AVWRAVRNSN DSSGRRTLYA PHVSGSLDDM RRQLDGIRAE GIPALMMMPM IVGLSNFHAL 250 260 270 280 290 300 AKEAEGLVVL AHPALSGATR IAPPLLLGRL FRLFGADATV FPHHGGRFAS TPQTCRALAD 310 320 330 340 350 360 AARGAWGGLK PCLPAPAGGI AIDRVAELLS FYGEDVMLLI GGSLLAAREQ LSEQAARFAA EVAAHGR

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB5." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000283 Genomic DNA. Translation: ABE39468.1.
RefSeq	YP_569369.1. NC_007958.1.
3D structure databases
ProteinModelPortal	Q138M1.
ModBase	Search...
Protein-protein interaction databases
STRING	316057.RPD_2233.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE39468; ABE39468; RPD_2233.
GeneID	4022718.
KEGG	rpd:RPD_2233.
PATRIC	23279445. VBIRhoPal120395_2298.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230274.
KO	K01601.
OMA	IEQSVEC.
ProtClustDB	CLSK924162.
Enzyme and pathway databases
BioCyc	RPAL316057:GHDC-2307-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q138M1_RHOPS

Accession

Primary (citable) accession number: Q138M1

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)