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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

RPD_2233

Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-2264-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:RPD_2233Imported
OrganismiRhodopseudomonas palustris (strain BisB5)Imported
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001818 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316057.RPD_2233.

Structurei

3D structure databases

ProteinModelPortaliQ138M1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini121 – 346226RuBisCO_largeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4107T6J. Bacteria.
COG1850. LUCA.
HOGENOMiHOG000230274.
KOiK01601.
OMAiIEQSVEC.
OrthoDBiEOG6MM1J2.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

Q138M1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDDRFIATY QVTSEPARIA ERAQALAIEQ SVECPLEAIG DPWVRDAVLG
60 70 80 90 100
RVAGIDEIAE GRYAVRIALA SATAPAEPGQ LINMLFGNAS IQPDVALTDV
110 120 130 140 150
ELPPLYLKAF GGPKLGSDGI RALAGAHGRA LTASALKPQG LSPQALAAIA
160 170 180 190 200
GRLAAGGVDL IKDDHGLADQ AYSPFAARIA AVWRAVRNSN DSSGRRTLYA
210 220 230 240 250
PHVSGSLDDM RRQLDGIRAE GIPALMMMPM IVGLSNFHAL AKEAEGLVVL
260 270 280 290 300
AHPALSGATR IAPPLLLGRL FRLFGADATV FPHHGGRFAS TPQTCRALAD
310 320 330 340 350
AARGAWGGLK PCLPAPAGGI AIDRVAELLS FYGEDVMLLI GGSLLAAREQ
360
LSEQAARFAA EVAAHGR
Length:367
Mass (Da):38,335
Last modified:October 31, 2006 - v1
Checksum:i73B642A458DA83A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE39468.1.
RefSeqiWP_011502650.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE39468; ABE39468; RPD_2233.
KEGGirpd:RPD_2233.
PATRICi23279445. VBIRhoPal120395_2298.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000283 Genomic DNA. Translation: ABE39468.1.
RefSeqiWP_011502650.1. NC_007958.1.

3D structure databases

ProteinModelPortaliQ138M1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316057.RPD_2233.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE39468; ABE39468; RPD_2233.
KEGGirpd:RPD_2233.
PATRICi23279445. VBIRhoPal120395_2298.

Phylogenomic databases

eggNOGiENOG4107T6J. Bacteria.
COG1850. LUCA.
HOGENOMiHOG000230274.
KOiK01601.
OMAiIEQSVEC.
OrthoDBiEOG6MM1J2.

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-2264-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB5Imported.

Entry informationi

Entry nameiQ138M1_RHOPS
AccessioniPrimary (citable) accession number: Q138M1
Entry historyi
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: April 13, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.