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Q138M1 (Q138M1_RHOPS) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABE39468.1
Gene names
Ordered Locus Names:RPD_2233 EMBL ABE39468.1
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP] EMBL ABE39468.1
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABE39468.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q138M1 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 73B642A458DA83A6

FASTA36738,335
        10         20         30         40         50         60 
MTDDRFIATY QVTSEPARIA ERAQALAIEQ SVECPLEAIG DPWVRDAVLG RVAGIDEIAE 

        70         80         90        100        110        120 
GRYAVRIALA SATAPAEPGQ LINMLFGNAS IQPDVALTDV ELPPLYLKAF GGPKLGSDGI 

       130        140        150        160        170        180 
RALAGAHGRA LTASALKPQG LSPQALAAIA GRLAAGGVDL IKDDHGLADQ AYSPFAARIA 

       190        200        210        220        230        240 
AVWRAVRNSN DSSGRRTLYA PHVSGSLDDM RRQLDGIRAE GIPALMMMPM IVGLSNFHAL 

       250        260        270        280        290        300 
AKEAEGLVVL AHPALSGATR IAPPLLLGRL FRLFGADATV FPHHGGRFAS TPQTCRALAD 

       310        320        330        340        350        360 
AARGAWGGLK PCLPAPAGGI AIDRVAELLS FYGEDVMLLI GGSLLAAREQ LSEQAARFAA 


EVAAHGR 

« Hide

References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5 EMBL ABE39468.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000283 Genomic DNA. Translation: ABE39468.1.
RefSeqYP_569369.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ138M1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316057.RPD_2233.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE39468; ABE39468; RPD_2233.
GeneID4022718.
KEGGrpd:RPD_2233.
PATRIC23279445. VBIRhoPal120395_2298.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230274.
KOK01601.
OMAIEQSVEC.
OrthoDBEOG6MM1J2.
ProtClustDBCLSK924162.

Enzyme and pathway databases

BioCycRPAL316057:GHDC-2264-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ138M1_RHOPS
AccessionPrimary (citable) accession number: Q138M1
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: January 22, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)