Q137U0 (Q137U0_RHOPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Agarase EMBL ABE39649.1
EC=3.2.1.81 EMBL ABE39649.1

Gene names

Ordered Locus Names:

RPD_2419

Organism

Rhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]

Taxonomic identifier

316057 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length	450 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABE39649.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q137U0 [UniParc]. Last modified October 31, 2006. Version 1. Checksum: 02BCA4124CCA1B76	FASTA	450	49,617
	10 20 30 40 50 60 MTEISRTRWG GLADRKAKAT GFFRVEPIDG VWWFVDPDGG RFLSKGVTAV NFDHDNIKDT 70 80 90 100 110 120 ERHPYREACL RKYGSRDAWR GAAAGRLASW GFNTLGAWSE PEIAHAGPTP LASAAGVVYL 130 140 150 160 170 180 ATAYSDGRGW PQSDLFDPAF ETFAQQRARE ICAPRRDDPT VLGWFIDNEL QWGPDWRGEN 190 200 210 220 230 240 ELLPVILRDG AAPCSRRVAV ELLRGRYSSV DEFNAVWSSA ASSWDALETG PVTPPPFTRN 250 260 270 280 290 300 FFTNDRAQER HPLRARYFAD CDAFAGRLAE RYMAVSAAAI RAAAPYHLVL GSRFAYVPQP 310 320 330 340 350 360 DVVAATARHV DVISINCYDA LPDAVIDAYA AAGRPCLIGE FSFRSDDAGM PNTQGAGPRV 370 380 390 400 410 420 ATQAERAAGF SRYATAALRC PNLIGYHWFL HADQPAEGRW DGENSNYGVV TIDDEVYAEL 430 440 450 TQTMTALNAQ AEHLHDNATM VVRIERHAVG

References

[1]

"Complete sequence of Rhodopseudomonas palustris BisB5." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BisB5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000283 Genomic DNA. Translation: ABE39649.1.
RefSeq	YP_569550.1. NC_007958.1.
3D structure databases
ProteinModelPortal	Q137U0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q137U0.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4022910.
GenomeReviews	Gene locus RPD_2419 in contig CP000283_GR.
KEGG	rpd:RPD_2419.
PATRIC	23279848. VBIRhoPal120395_2496.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG660148.
OMA	RFLSKGV.
ProtClustDB	CLSK819549.
Enzyme and pathway databases
BioCyc	RPAL316057:RPD_2419-MONOMER.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q137U0_RHOPS

Accession

Primary (citable) accession number: Q137U0

Entry history

Integrated into UniProtKB/TrEMBL:	October 31, 2006
Last sequence update:	October 31, 2006
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)