ID NCOA4_HUMAN Reviewed; 614 AA. AC Q13772; A8K8W5; B4E260; E9PAV7; J3KQN8; Q14239; DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot. DT 01-NOV-1996, sequence version 1. DT 24-JAN-2024, entry version 214. DE RecName: Full=Nuclear receptor coactivator 4; DE Short=NCoA-4; DE AltName: Full=Androgen receptor coactivator 70 kDa protein; DE Short=70 kDa AR-activator; DE Short=70 kDa androgen receptor coactivator; DE AltName: Full=Androgen receptor-associated protein of 70 kDa; DE AltName: Full=Ret-activating protein ELE1; GN Name=NCOA4; Synonyms=ARA70, ELE1, RFG; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RC TISSUE=Prostatic carcinoma; RX PubMed=8643607; DOI=10.1073/pnas.93.11.5517; RA Yeh S., Chang C.; RT "Cloning and characterization of a specific coactivator, ARA70, for the RT androgen receptor in human prostate cells."; RL Proc. Natl. Acad. Sci. U.S.A. 93:5517-5521(1996). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA], AND CHROMOSOMAL REARRANGEMENT WITH RET. RC TISSUE=Thyroid; RX PubMed=8290261; RA Santoro M., Dathan N.A., Berlingieri M.T., Bongarzone I., Paulin C., RA Grieco M., Pierotti M.A., Vecchio G., Fusco A.; RT "Molecular characterization of RET/PTC3; a novel rearranged version of the RT RETproto-oncogene in a human thyroid papillary carcinoma."; RL Oncogene 9:509-516(1994). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS ALPHA; 3 AND 4). RC TISSUE=Testis, and Trachea; RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., RA Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Melanoma; RX PubMed=17974005; DOI=10.1186/1471-2164-8-399; RA Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., RA Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., RA Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., RA Wiemann S., Schupp I.; RT "The full-ORF clone resource of the German cDNA consortium."; RL BMC Genomics 8:399-399(2007). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=15164054; DOI=10.1038/nature02462; RA Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., RA Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., RA Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., RA Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P., RA Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J., RA Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J., Brown J.Y., RA Burford D.C., Burrill W., Burton J., Cahill P., Camire D., Carter N.P., RA Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S., Corby N., RA Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L., Frankish A., RA Frankland J.A., Garner P., Garnett J., Gribble S., Griffiths C., RA Grocock R., Gustafson E., Hammond S., Harley J.L., Hart E., Heath P.D., RA Ho T.P., Hopkins B., Horne J., Howden P.J., Huckle E., Hynds C., RA Johnson C., Johnson D., Kana A., Kay M., Kimberley A.M., Kershaw J.K., RA Kokkinaki M., Laird G.K., Lawlor S., Lee H.M., Leongamornlert D.A., RA Laird G., Lloyd C., Lloyd D.M., Loveland J., Lovell J., McLaren S., RA McLay K.E., McMurray A., Mashreghi-Mohammadi M., Matthews L., Milne S., RA Nickerson T., Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., RA Peck A.I., Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., RA Ross M.T., Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., RA Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W., Tracey A., RA Tromans A., Tsolas J., Wall M., Walsh J., Wang H., Weinstock K., West A.P., RA Willey D.L., Whitehead S.L., Wilming L., Wray P.W., Young L., Chen Y., RA Lovering R.C., Moschonas N.K., Siebert R., Fechtel K., Bentley D., RA Durbin R.M., Hubbard T., Doucette-Stamm L., Beck S., Smith D.R., Rogers J.; RT "The DNA sequence and comparative analysis of human chromosome 10."; RL Nature 429:375-381(2004). RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., RA Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., RA Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., RA Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., RA Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., RA Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., RA Hunkapiller M.W., Myers E.W., Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [7] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM ALPHA). RC TISSUE=Placenta; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [8] RP NUCLEOTIDE SEQUENCE [MRNA] OF 1-238, AND CHROMOSOMAL REARRANGEMENT WITH RP RET. RC TISSUE=Thyroid tumor; RX PubMed=8187085; RA Bongarzone I., Butti M.G., Coronelli S., Borrello M.G., Santoro M., RA Mondellini P., Pilotti S., Fusco A., Della Porta G., Pierotti M.A.; RT "Frequent activation of ret protooncogene by fusion with a new activating RT gene in papillary thyroid carcinomas."; RL Cancer Res. 54:2979-2985(1994). RN [9] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS ALPHA AND BETA), AND VARIANTS LEU-94; RP LEU-154; ARG-350 AND PRO-561. RC TISSUE=Cervix carcinoma, Mammary cancer, and Prostatic carcinoma; RX PubMed=9892017; DOI=10.1210/mend.13.1.0214; RA Alen P., Claessens F., Schoenmakers E., Swinnen J.V., Verhoeven G., RA Rombauts W., Peeters B.; RT "Interaction of the putative androgen receptor-specific coactivator RT ARA70/ELE1alpha with multiple steroid receptors and identification of an RT internally deleted ELE1beta isoform."; RL Mol. Endocrinol. 13:117-128(1999). RN [10] RP FUNCTION. RX PubMed=10347167; DOI=10.1074/jbc.274.23.16147; RA Heinlein C.A., Ting H.-J., Yeh S., Chang C.; RT "Identification of ARA70 as a ligand-enhanced coactivator for the RT peroxisome proliferator-activated receptor gamma."; RL J. Biol. Chem. 274:16147-16152(1999). CC -!- FUNCTION: Enhances the androgen receptor transcriptional activity in CC prostate cancer cells. Ligand-independent coactivator of the peroxisome CC proliferator-activated receptor (PPAR) gamma. CC {ECO:0000269|PubMed:10347167}. CC -!- SUBUNIT: Interacts with the androgen receptor and the retinoid X CC receptor (RXR) in a ligand-dependent manner. CC -!- INTERACTION: CC Q13772-3; Q9UBB4: ATXN10; NbExp=3; IntAct=EBI-12054609, EBI-702390; CC Q13772-3; Q8WXH2: JPH3; NbExp=3; IntAct=EBI-12054609, EBI-1055254; CC Q13772-3; Q9UJV3-2: MID2; NbExp=3; IntAct=EBI-12054609, EBI-10172526; CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=4; CC Comment=Additional isoforms seem to exist.; CC Name=Alpha; CC IsoId=Q13772-1; Sequence=Displayed; CC Name=Beta; CC IsoId=Q13772-2; Sequence=VSP_003409; CC Name=3; CC IsoId=Q13772-3; Sequence=VSP_046348; CC Name=4; CC IsoId=Q13772-4; Sequence=VSP_046348, VSP_046349; CC -!- TISSUE SPECIFICITY: Widely expressed. Also detected in adipose tissues CC and in different cell lines. Isoform Beta is only expressed in testis. CC -!- DISEASE: Note=A chromosomal aberration involving NCOA4 is found in CC papillary thyroid carcinomas (PTCs). Inversion inv(10)(q11.2;q11.2) CC generates the RET/NCOA4 (PTC3) oncogene. {ECO:0000269|PubMed:8187085, CC ECO:0000269|PubMed:8290261}. CC -!- WEB RESOURCE: Name=Atlas of Genetics and Cytogenetics in Oncology and CC Haematology; CC URL="https://atlasgeneticsoncology.org/gene/218/NCOA4"; CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; L49399; AAC37591.1; -; mRNA. DR EMBL; X77548; CAA54673.1; -; mRNA. DR EMBL; AK292480; BAF85169.1; -; mRNA. DR EMBL; AK304123; BAG65022.1; -; mRNA. DR EMBL; AK310849; -; NOT_ANNOTATED_CDS; mRNA. DR EMBL; AL162047; CAB82390.1; -; mRNA. DR EMBL; AL450342; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH471260; EAW53686.1; -; Genomic_DNA. DR EMBL; BC001562; AAH01562.1; -; mRNA. DR EMBL; X71413; CAA50536.1; -; mRNA. DR CCDS; CCDS73092.1; -. [Q13772-1] DR CCDS; CCDS73093.1; -. [Q13772-3] DR CCDS; CCDS73094.1; -. [Q13772-4] DR PIR; S61532; S61532. DR RefSeq; NP_001138732.1; NM_001145260.1. [Q13772-4] DR RefSeq; NP_001138733.1; NM_001145261.1. [Q13772-3] DR RefSeq; NP_001138734.1; NM_001145262.1. [Q13772-1] DR RefSeq; NP_001138735.1; NM_001145263.1. [Q13772-1] DR RefSeq; NP_005428.1; NM_005437.3. [Q13772-1] DR PDB; 1T5Z; X-ray; 2.30 A; B=322-336. DR PDBsum; 1T5Z; -. DR AlphaFoldDB; Q13772; -. DR SMR; Q13772; -. DR BioGRID; 113726; 55. DR DIP; DIP-5957N; -. DR IntAct; Q13772; 22. DR STRING; 9606.ENSP00000463027; -. DR BindingDB; Q13772; -. DR GlyCosmos; Q13772; 1 site, 1 glycan. DR GlyGen; Q13772; 2 sites, 1 O-linked glycan (2 sites). DR iPTMnet; Q13772; -. DR PhosphoSitePlus; Q13772; -. DR BioMuta; NCOA4; -. DR DMDM; 8928226; -. DR EPD; Q13772; -. DR jPOST; Q13772; -. DR MassIVE; Q13772; -. DR MaxQB; Q13772; -. DR PaxDb; 9606-ENSP00000463027; -. DR PeptideAtlas; Q13772; -. DR ProteomicsDB; 19088; -. DR ProteomicsDB; 59681; -. [Q13772-1] DR ProteomicsDB; 59682; -. [Q13772-2] DR Pumba; Q13772; -. DR Antibodypedia; 72715; 485 antibodies from 34 providers. DR DNASU; 8031; -. DR Ensembl; ENST00000578454.5; ENSP00000463027.1; ENSG00000266412.6. [Q13772-4] DR Ensembl; ENST00000579039.2; ENSP00000463455.1; ENSG00000266412.6. [Q13772-3] DR Ensembl; ENST00000581486.6; ENSP00000462943.1; ENSG00000266412.6. [Q13772-1] DR Ensembl; ENST00000583565.5; ENSP00000463476.1; ENSG00000266412.6. [Q13772-1] DR Ensembl; ENST00000585132.5; ENSP00000464054.1; ENSG00000266412.6. [Q13772-1] DR GeneID; 8031; -. DR KEGG; hsa:8031; -. DR MANE-Select; ENST00000581486.6; ENSP00000462943.1; NM_001145263.2; NP_001138735.1. DR UCSC; uc001jis.5; human. [Q13772-1] DR AGR; HGNC:7671; -. DR CTD; 8031; -. DR DisGeNET; 8031; -. DR GeneCards; NCOA4; -. DR HGNC; HGNC:7671; NCOA4. DR HPA; ENSG00000266412; Low tissue specificity. DR MalaCards; NCOA4; -. DR MIM; 601984; gene. DR neXtProt; NX_Q13772; -. DR OpenTargets; ENSG00000266412; -. DR Orphanet; 146; Differentiated thyroid carcinoma. DR PharmGKB; PA31473; -. DR VEuPathDB; HostDB:ENSG00000266412; -. DR eggNOG; ENOG502QQ6V; Eukaryota. DR GeneTree; ENSGT00390000008403; -. DR HOGENOM; CLU_034170_0_0_1; -. DR InParanoid; Q13772; -. DR OMA; FPPDCYG; -. DR OrthoDB; 3016401at2759; -. DR PhylomeDB; Q13772; -. DR TreeFam; TF333204; -. DR PathwayCommons; Q13772; -. DR SignaLink; Q13772; -. DR SIGNOR; Q13772; -. DR BioGRID-ORCS; 8031; 157 hits in 1161 CRISPR screens. DR ChiTaRS; NCOA4; human. DR EvolutionaryTrace; Q13772; -. DR GeneWiki; NCOA4; -. DR GenomeRNAi; 8031; -. DR Pharos; Q13772; Tbio. DR PRO; PR:Q13772; -. DR Proteomes; UP000005640; Chromosome 10. DR RNAct; Q13772; Protein. DR Bgee; ENSG00000266412; Expressed in jejunal mucosa and 215 other cell types or tissues. DR ExpressionAtlas; Q13772; baseline and differential. DR GO; GO:0044754; C:autolysosome; IDA:MGI. DR GO; GO:0005634; C:nucleus; TAS:ProtInc. DR GO; GO:0003713; F:transcription coactivator activity; TAS:ProtInc. DR GO; GO:0071391; P:cellular response to estrogen stimulus; NAS:ARUK-UCL. DR GO; GO:0071394; P:cellular response to testosterone stimulus; NAS:ARUK-UCL. DR GO; GO:0030520; P:intracellular estrogen receptor signaling pathway; NAS:ARUK-UCL. DR GO; GO:0006879; P:intracellular iron ion homeostasis; IEA:Ensembl. DR GO; GO:0008584; P:male gonad development; TAS:ProtInc. DR GO; GO:0006622; P:protein targeting to lysosome; IDA:MGI. DR GO; GO:0009725; P:response to hormone; IBA:GO_Central. DR IDEAL; IID00074; -. DR InterPro; IPR022174; ARA70. DR InterPro; IPR039947; NCoA-4. DR PANTHER; PTHR17085; NUCLEAR RECEPTOR COACTIVATOR 4; 1. DR PANTHER; PTHR17085:SF5; NUCLEAR RECEPTOR COACTIVATOR 4; 1. DR Pfam; PF12489; ARA70; 2. DR Genevisible; Q13772; HS. PE 1: Evidence at protein level; KW 3D-structure; Activator; Alternative splicing; Chromosomal rearrangement; KW Proto-oncogene; Reference proteome; Transcription; KW Transcription regulation. FT CHAIN 1..614 FT /note="Nuclear receptor coactivator 4" FT /id="PRO_0000094410" FT REGION 501..524 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT SITE 238..239 FT /note="Breakpoint for rearrangement to form RET/PTC3 FT oncogene" FT VAR_SEQ 1 FT /note="M -> MGAQLTTFALAGAVRRM (in isoform 3 and isoform 4)" FT /evidence="ECO:0000303|PubMed:14702039" FT /id="VSP_046348" FT VAR_SEQ 239..565 FT /note="Missing (in isoform Beta)" FT /evidence="ECO:0000303|PubMed:9892017" FT /id="VSP_003409" FT VAR_SEQ 614 FT /note="M -> AYFKMNFQDVTVGNFQIPCGF (in isoform 4)" FT /evidence="ECO:0000303|PubMed:14702039" FT /id="VSP_046349" FT VARIANT 94 FT /note="S -> L (in dbSNP:rs782517064)" FT /evidence="ECO:0000269|PubMed:9892017" FT /id="VAR_009190" FT VARIANT 154 FT /note="F -> L" FT /evidence="ECO:0000269|PubMed:9892017" FT /id="VAR_009191" FT VARIANT 350 FT /note="C -> R" FT /evidence="ECO:0000269|PubMed:9892017" FT /id="VAR_009192" FT VARIANT 474 FT /note="P -> R (in dbSNP:rs1132111)" FT /id="VAR_014928" FT VARIANT 561 FT /note="L -> P" FT /evidence="ECO:0000269|PubMed:9892017" FT /id="VAR_009193" FT MUTAGEN 95..96 FT /note="LL->AA: Decreased interaction with PPAR and RXR." FT CONFLICT 71 FT /note="Y -> H (in Ref. 3; BAG65022)" FT /evidence="ECO:0000305" FT CONFLICT 162 FT /note="I -> T (in Ref. 8; CAA50536)" FT /evidence="ECO:0000305" FT CONFLICT 183 FT /note="G -> S (in Ref. 8; CAA50536)" FT /evidence="ECO:0000305" FT CONFLICT 271 FT /note="K -> R (in Ref. 3; AK310849)" FT /evidence="ECO:0000305" FT HELIX 327..333 FT /evidence="ECO:0007829|PDB:1T5Z" FT CONFLICT Q13772-3:8 FT /note="F -> V (in Ref. 3; BAG65022)" FT /evidence="ECO:0000305" FT CONFLICT Q13772-4:8 FT /note="F -> V (in Ref. 3; AK310849)" FT /evidence="ECO:0000305" SQ SEQUENCE 614 AA; 69726 MW; 36B6D97C7D072BFF CRC64; MNTFQDQSGS SSNREPLLRC SDARRDLELA IGGVLRAEQQ IKDNLREVKA QIHSCISRHL ECLRSREVWL YEQVDLIYQL KEETLQQQAQ QLYSLLGQFN CLTHQLECTQ NKDLANQVSV CLERLGSLTL KPEDSTVLLF EADTITLRQT ITTFGSLKTI QIPEHLMAHA SSANIGPFLE KRGCISMPEQ KSASGIVAVP FSEWLLGSKP ASGYQAPYIP STDPQDWLTQ KQTLENSQTS SRACNFFNNV GGNLKGLENW LLKSEKSSYQ KCNSHSTTSS FSIEMEKVGD QELPDQDEMD LSDWLVTPQE SHKLRKPENG SRETSEKFKL LFQSYNVNDW LVKTDSCTNC QGNQPKGVEI ENLGNLKCLN DHLEAKKPLS TPSMVTEDWL VQNHQDPCKV EEVCRANEPC TSFAECVCDE NCEKEALYKW LLKKEGKDKN GMPVEPKPEP EKHKDSLNMW LCPRKEVIEQ TKAPKAMTPS RIADSFQVIK NSPLSEWLIR PPYKEGSPKE VPGTEDRAGK QKFKSPMNTS WCSFNTADWV LPGKKMGNLS QLSSGEDKWL LRKKAQEVLL NSPLQEEHNF PPDHYGLPAV CDLFACMQLK VDKEKWLYRT PLQM //