Q13772 (NCOA4_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 134.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Nuclear receptor coactivator 4 Short name=NCoA-4 Alternative name(s): Androgen receptor coactivator 70 kDa protein Short name=70 kDa AR-activator Short name=70 kDa androgen receptor coactivator Androgen receptor-associated protein of 70 kDa Ret-activating protein ELE1 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 614 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Enhances the androgen receptor transcriptional activity in prostate cancer cells. Ligand-independent coactivator of the peroxisome proliferator-activated receptor (PPAR) gamma. Ref.10 |
| Subunit structure | Interacts with the androgen receptor and the retinoid X receptor (RXR) in a ligand-dependent manner. |
| Tissue specificity | Widely expressed. Also detected in adipose tissues and in different cell lines. Isoform Beta is only expressed in testis. |
| Involvement in disease | Thyroid papillary carcinoma (TPC) [MIM:188550]: A common tumor of the thyroid that typically arises as an irregular, solid or cystic mass from otherwise normal thyroid tissue. Papillary carcinomas are malignant neoplasm characterized by the formation of numerous, irregular, finger-like projections of fibrous stroma that is covered with a surface layer of neoplastic epithelial cells. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation |
| Coding sequence diversity | Alternative splicing Chromosomal rearrangement Polymorphism |
| Disease | Proto-oncogene |
| Molecular function | Activator |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | androgen receptor signaling pathway Non-traceable author statement PubMed 15572661. Source: UniProtKB male gonad developmentTraceable author statement Ref.1. Source: ProtInc positive regulation of transcription, DNA-dependentNon-traceable author statement PubMed 15572661. Source: UniProtKB transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular_component | nucleus Traceable author statement Ref.1. Source: ProtInc |
| Molecular_function | androgen receptor binding Non-traceable author statement PubMed 15572661. Source: UniProtKB transcription coactivator activityNon-traceable author statement PubMed 15572661. Source: UniProtKB |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] Note: Additional isoforms seem to exist. | ||||||
| Isoform Alpha (identifier: Q13772-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform Beta (identifier: Q13772-2) The sequence of this isoform differs from the canonical sequence as follows: 239-565: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q13772-3) The sequence of this isoform differs from the canonical sequence as follows: 1-1: M → MGAQLTTFALAGAVRRM | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q13772-4) The sequence of this isoform differs from the canonical sequence as follows: 1-1: M → MGAQLTTFALAGAVRRM 614-614: M → AYFKMNFQDVTVGNFQIPCGF | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 614 | 614 | Nuclear receptor coactivator 4 | PRO_0000094410 | |||||||
Sites | |||||||||||
| Site | 238 – 239 | 2 | Breakpoint for rearrangement to form RET/PTC3 oncogene | ||||||||
Natural variations | |||||||||||
| Alternative sequence | 1 | 1 | M → MGAQLTTFALAGAVRRM in isoform 3 and isoform 4. | VSP_046348 | |||||||
| Alternative sequence | 239 – 565 | 327 | Missing in isoform Beta. | VSP_003409 | |||||||
| Alternative sequence | 614 | 1 | M → AYFKMNFQDVTVGNFQIPCG F in isoform 4. | VSP_046349 | |||||||
| Natural variant | 94 | 1 | S → L. Ref.9 | VAR_009190 | |||||||
| Natural variant | 154 | 1 | F → L. Ref.9 | VAR_009191 | |||||||
| Natural variant | 350 | 1 | C → R. Ref.9 | VAR_009192 | |||||||
| Natural variant | 474 | 1 | P → R. Corresponds to variant rs1132111 [ dbSNP | Ensembl ]. | VAR_014928 | |||||||
| Natural variant | 561 | 1 | L → P. Ref.9 | VAR_009193 | |||||||
Experimental info | |||||||||||
| Mutagenesis | 95 – 96 | 2 | LL → AA: Decreased interaction with PPAR and RXR. | ||||||||
| Sequence conflict | 71 | 1 | Y → H in BAG65022. Ref.3 | ||||||||
| Sequence conflict | 162 | 1 | I → T in CAA50536. Ref.8 | ||||||||
| Sequence conflict | 183 | 1 | G → S in CAA50536. Ref.8 | ||||||||
| Sequence conflict | 271 | 1 | K → R in AK310849. Ref.3 | ||||||||
| Isoform 3: | |||||||||||
| Sequence conflict | 8 | 1 | F → V in BAG65022. Ref.3 | ||||||||
| Isoform 4: | |||||||||||
| Sequence conflict | 8 | 1 | F → V in AK310849. Ref.3 | ||||||||
Secondary structure | |||||||||||
Helix Strand Turn | |||||||||||
| Helix | 327 – 333 | 7 | |||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning and characterization of a specific coactivator, ARA70, for the androgen receptor in human prostate cells." Yeh S., Chang C. Proc. Natl. Acad. Sci. U.S.A. 93:5517-5521(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Prostatic carcinoma. |
| [2] | "Molecular characterization of RET/PTC3; a novel rearranged version of the RETproto-oncogene in a human thyroid papillary carcinoma." Santoro M., Dathan N.A., Berlingieri M.T., Bongarzone I., Paulin C., Grieco M., Pierotti M.A., Vecchio G., Fusco A. Oncogene 9:509-516(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Tissue: Thyroid. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS ALPHA; 3 AND 4). Tissue: Testis and Trachea. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Melanoma. |
| [5] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM ALPHA). Tissue: Placenta. |
| [8] | "Frequent activation of ret protooncogene by fusion with a new activating gene in papillary thyroid carcinomas." Bongarzone I., Butti M.G., Coronelli S., Borrello M.G., Santoro M., Mondellini P., Pilotti S., Fusco A., Della Porta G., Pierotti M.A. Cancer Res. 54:2979-2985(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1-238. Tissue: Thyroid tumor. |
| [9] | "Interaction of the putative androgen receptor-specific coactivator ARA70/ELE1alpha with multiple steroid receptors and identification of an internally deleted ELE1beta isoform." Alen P., Claessens F., Schoenmakers E., Swinnen J.V., Verhoeven G., Rombauts W., Peeters B. Mol. Endocrinol. 13:117-128(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS ALPHA AND BETA), VARIANTS LEU-94; LEU-154; ARG-350 AND PRO-561. Tissue: Cervix carcinoma, Mammary cancer and Prostatic carcinoma. |
| [10] | "Identification of ARA70 as a ligand-enhanced coactivator for the peroxisome proliferator-activated receptor gamma." Heinlein C.A., Ting H.-J., Yeh S., Chang C. J. Biol. Chem. 274:16147-16152(1999) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | L49399 mRNA. Translation: AAC37591.1. X77548 mRNA. Translation: CAA54673.1. AK292480 mRNA. Translation: BAF85169.1. AK304123 mRNA. Translation: BAG65022.1. AK310849 mRNA. No translation available. AL162047 mRNA. Translation: CAB82390.1. AL450342 Genomic DNA. Translation: CAI14478.1. CH471260 Genomic DNA. Translation: EAW53686.1. BC001562 mRNA. Translation: AAH01562.1. X71413 mRNA. Translation: CAA50536.1. | ||||||||||||
| IPI | IPI00015145. IPI00221177. IPI00922559. | ||||||||||||
| PIR | S61532. | ||||||||||||
| RefSeq | NP_001138732.1. NM_001145260.1. NP_001138734.1. NM_001145262.1. NP_001138735.1. NM_001145263.1. NP_005428.1. NM_005437.3. | ||||||||||||
| UniGene | Hs.643658. Hs.709644. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q13772. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| DIP | DIP-5957N. | ||||||||||||
| IntAct | Q13772. 5 interactions. | ||||||||||||
| MINT | MINT-2864695. | ||||||||||||
| STRING | 9606.ENSP00000395465. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q13772. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 8928226. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | Q13772. | ||||||||||||
| PRIDE | Q13772. | ||||||||||||
Protocols and materials databases | |||||||||||||
| DNASU | 8031. | ||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000344348; ENSP00000344552; ENSG00000138293. ENST00000374087; ENSP00000363200; ENSG00000138293. ENST00000438493; ENSP00000405146; ENSG00000138293. ENST00000443446; ENSP00000390713; ENSG00000138293. ENST00000452682; ENSP00000395465; ENSG00000138293. ENST00000581486; ENSP00000462943; ENSG00000266412. ENST00000583565; ENSP00000463476; ENSG00000266412. ENST00000585132; ENSP00000464054; ENSG00000266412. | ||||||||||||
| GeneID | 8031. | ||||||||||||
| KEGG | hsa:8031. | ||||||||||||
| UCSC | uc001jis.4. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 8031. | ||||||||||||
| GeneCards | GC10P051565. | ||||||||||||
| HGNC | HGNC:7671. NCOA4. | ||||||||||||
| MIM | 188550. phenotype. 601984. gene. | ||||||||||||
| neXtProt | NX_Q13772. | ||||||||||||
| PharmGKB | PA31473. | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | NOG40301. | ||||||||||||
| HOGENOM | HOG000013175. | ||||||||||||
| HOVERGEN | HBG052584. | ||||||||||||
| InParanoid | Q13772. | ||||||||||||
| KO | K09289. | ||||||||||||
| OrthoDB | EOG4G4GQ3. | ||||||||||||
| PhylomeDB | Q13772. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| Pathway_Interaction_DB | ar_pathway. Coregulation of Androgen receptor activity. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q13772. | ||||||||||||
| Bgee | Q13772. | ||||||||||||
| CleanEx | HS_NCOA4. | ||||||||||||
| Genevestigator | Q13772. | ||||||||||||
| GermOnline | ENSG00000138293. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR022174. ARA70. [Graphical view] | ||||||||||||
| Pfam | PF12489. ARA70. 2 hits. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| EvolutionaryTrace | Q13772. | ||||||||||||
| GenomeRNAi | 8031. | ||||||||||||
| NextBio | 30615. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | NCOA4_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q13772 Secondary accession number(s): A8K8W5 Q14239 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |

Clusters with
