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Q135U9 (Q135U9_RHOPS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribonucleoside-diphosphate reductase class II EMBL ABE40140.1
EC=1.17.4.- EMBL ABE40140.1
Gene names
Ordered Locus Names:RPD_2912
OrganismRhodopseudomonas palustris (strain BisB5) [Complete proteome] [HAMAP]
Taxonomic identifier316057 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Rhodopseudomonas

Protein attributes

Sequence length1256 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q135U9 [UniParc].

Last modified October 31, 2006. Version 1.
Checksum: 489D549DBCED4B6F

FASTA1,256137,769
        10         20         30         40         50         60 
MKIERRYTTD GQSPYAAIQF RLTTSEIRNP DGSVVFRLEN VEVPDSWSQV ASDVLAQKYF 

        70         80         90        100        110        120 
RKAGVAARLK KVEEETVPSW LWRSVPDTEA LATLPDSERF TSEHSSKQVF DRLAGCWTYW 

       130        140        150        160        170        180 
GWKGDYFSSE DDARAFYDEL RYMLASQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDHK 

       190        200        210        220        230        240 
TGKLTKSKSA YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG 

       250        260        270        280        290        300 
EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI EAYIDWKVKE 

       310        320        330        340        350        360 
EQKVSALVTG SKLNQKHLKA ILKACVNCQG SGDDCFDPEK NPALRREVKL ARRALVTDAM 

       370        380        390        400        410        420 
IKRVIQYAKQ GYKEIDFPIY DTDWDSEAYL TVSGQNSNNS VSLKDDFLRA VETDGDWNLT 

       430        440        450        460        470        480 
GRTTKKVMKT LKARDLWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM 

       490        500        510        520        530        540 
FLDDTACNLA SANLLTFYDT TANVFDLGAY EHLCRLWTVV LEISVLMAQF PSKQIAELSY 

       550        560        570        580        590        600 
EFRTLGLGFA NIGGLLMTMG LSYDSKEGRA LCGALSAIMT GVSYATSAEM AAKLGPFPGY 

       610        620        630        640        650        660 
KKNAAHMLRV IRNHRRAAHG ESRGYEALSV APVPLDHAGC PIPEAITHAK AAWDRALELG 

       670        680        690        700        710        720 
ELHGYRNAQV SVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPAALR 

       730        740        750        760        770        780 
ILGYPENQIA EIEAYAVGHG SLSNAPAINH STLKAKGFTD EALAKVEAAL PTAFDIKFAF 

       790        800        810        820        830        840 
NKWTFGEDFL RQTLKIEADA IAAPNFDLLA ALGFSKREIE AANIHICGAM TVEGAPHLKA 

       850        860        870        880        890        900 
DHYAVFDCAN PCGKIGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKSAYM 

       910        920        930        940        950        960 
LSWKLALKAN ALYRDGSKLS QPLSSQLISD DDEDDDALDA FLEKPMAARA AHVSEKVVER 

       970        980        990       1000       1010       1020 
LVERIVVMRE RERMPDRRKG YTQKAVVGGH KVYLRTGEYD DGRIGEIFID MHKEGAALRS 

      1030       1040       1050       1060       1070       1080 
FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS 

      1090       1100       1110       1120       1130       1140 
YMGRFDLAHV DPSETGFDAI GKGVDEGKAP EGTPSSHAAT KYLSKGLTRS RTDNLVVMRG 

      1150       1160       1170       1180       1190       1200 
VPASPDSGSA PVKMAYSQPE THAKSTSRIG DVLEGATALK QEVQTDLSPT EKLEALQWSK 

      1210       1220       1230       1240       1250 
ANTAATQPAA SKAERRAEAK ARGYEGDSCG ECGNFTLVRN GTCMKCDTCG STTGCS

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References

[1]"Complete sequence of Rhodopseudomonas palustris BisB5."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Pelletier D.A., Kyrpides N., Lykidis A., Oda Y., Harwood C.S., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BisB5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000283 Genomic DNA. Translation: ABE40140.1.
RefSeqYP_570041.1. NC_007958.1.

3D structure databases

ProteinModelPortalQ135U9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ135U9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4023413.
GenomeReviewsGene locus RPD_2912 in contig CP000283_GR.
KEGGrpd:RPD_2912.
PATRIC23280885. VBIRhoPal120395_3005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0209.
HOGENOMHBG414188.
OMAFLWRSVP.
ProtClustDBPRK07562.

Enzyme and pathway databases

BioCycRPAL316057:RPD_2912-MONOMER.

Family and domain databases

InterProIPR002876. DUF28.
IPR017856. Integrase_Zn-bd_dom-like_N.
IPR013344. RDP_Rdtase_AdoCbl-dep.
IPR000788. Ribncl_red_lg_C.
IPR013678. Ribonuc_red_2_N.
IPR024434. TSCPD_dom.
[Graphical view]
Gene3DG3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KOK00525.
PfamPF08471. Ribonuc_red_2_N. 1 hit.
PF02867. Ribonuc_red_lgC. 2 hits.
PF12637. TSCPD. 1 hit.
[Graphical view]
PRINTSPR01183. RIBORDTASEM1.
SUPFAMSSF75625. DUF28. 1 hit.
TIGRFAMsTIGR02504. NrdJ_Z. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ135U9_RHOPS
AccessionPrimary (citable) accession number: Q135U9
Entry history
Integrated into UniProtKB/TrEMBL: October 31, 2006
Last sequence update: October 31, 2006
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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