Q13576 (IQGA2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 128.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Ras GTPase-activating-like protein IQGAP2 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1575 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Binds to activated CDC42 and RAC1 but does not seem to stimulate their GTPase activity. Associates with calmodulin. |
| Tissue specificity | Isoform 2 expression is enhanced in testis. |
| Sequence similarities | Contains 1 CH (calponin-homology) domain. Contains 3 IQ domains. Contains 1 Ras-GAP domain. Contains 1 WW domain. |
Ontologies
| Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Repeat |
| Ligand | Calmodulin-binding |
| PTM | Phosphoprotein |
| Technical term | 3D-structure Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Biological_process | positive regulation of Ras GTPase activity Inferred from electronic annotation. Source: GOC signal transductionTraceable author statement Ref.1. Source: ProtInc small GTPase mediated signal transductionInferred from electronic annotation. Source: InterPro |
| Cellular_component | actin cytoskeleton Traceable author statement Ref.1. Source: ProtInc microtubuleInferred from direct assay PubMed 21525035. Source: UniProtKB microvillusInferred from electronic annotation. Source: Compara |
| Molecular_function | GTPase inhibitor activity Traceable author statement Ref.1. Source: ProtInc Ras GTPase activator activityInferred from electronic annotation. Source: InterPro actin bindingTraceable author statement Ref.1. Source: ProtInc |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q13576-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q13576-2) The sequence of this isoform differs from the canonical sequence as follows: 1-447: Missing. 448-453: QEENDR → MHSLPG 642-698: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed Ref.5 | ||||||||||||||||||||||||
| Chain | 2 – 1575 | 1574 | Ras GTPase-activating-like protein IQGAP2 | PRO_0000056650 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 41 – 156 | 116 | CH | ||||||||||||||||||||||||
| Domain | 594 – 627 | 34 | WW | ||||||||||||||||||||||||
| Domain | 690 – 719 | 30 | IQ 1 | ||||||||||||||||||||||||
| Domain | 720 – 749 | 30 | IQ 2 | ||||||||||||||||||||||||
| Domain | 750 – 779 | 30 | IQ 3 | ||||||||||||||||||||||||
| Domain | 917 – 1150 | 234 | Ras-GAP | ||||||||||||||||||||||||
| Compositional bias | 263 – 266 | 4 | Poly-Lys | ||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||
| Modified residue | 16 | 1 | Phosphoserine Ref.7 Ref.8 | ||||||||||||||||||||||||
| Modified residue | 1389 | 1 | Phosphoserine By similarity | ||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||
| Alternative sequence | 1 – 447 | 447 | Missing in isoform 2. | VSP_010629 | |||||||||||||||||||||||
| Alternative sequence | 448 – 453 | 6 | QEENDR → MHSLPG in isoform 2. | VSP_010630 | |||||||||||||||||||||||
| Alternative sequence | 642 – 698 | 57 | Missing in isoform 2. | VSP_010631 | |||||||||||||||||||||||
| Natural variant | 455 | 1 | V → A. Corresponds to variant rs7722711 [ dbSNP | Ensembl ]. | VAR_055823 | |||||||||||||||||||||||
| Natural variant | 479 | 1 | P → R. Corresponds to variant rs3822530 [ dbSNP | Ensembl ]. | VAR_055824 | |||||||||||||||||||||||
| Natural variant | 527 | 1 | D → E. Ref.1 Ref.2 Ref.3 Corresponds to variant rs2431352 [ dbSNP | Ensembl ]. | VAR_062958 | |||||||||||||||||||||||
| Natural variant | 532 | 1 | K → E. Ref.1 Ref.2 Ref.3 Corresponds to variant rs2909888 [ dbSNP | Ensembl ]. | VAR_059292 | |||||||||||||||||||||||
| Natural variant | 629 | 1 | L → F. Ref.1 Ref.2 Ref.9 Corresponds to variant rs2455230 [ dbSNP | Ensembl ]. | VAR_062959 | |||||||||||||||||||||||
| Natural variant | 714 | 1 | R → W. Corresponds to variant rs35366349 [ dbSNP | Ensembl ]. | VAR_055825 | |||||||||||||||||||||||
| Natural variant | 724 | 1 | I → V. Ref.1 Ref.2 Corresponds to variant rs2431363 [ dbSNP | Ensembl ]. | VAR_062960 | |||||||||||||||||||||||
| Natural variant | 894 | 1 | T → I. Corresponds to variant rs34950321 [ dbSNP | Ensembl ]. | VAR_055826 | |||||||||||||||||||||||
| Natural variant | 1052 | 1 | R → I. Corresponds to variant rs2287932 [ dbSNP | Ensembl ]. | VAR_055827 | |||||||||||||||||||||||
| Natural variant | 1184 | 1 | N → S. Corresponds to variant rs10454915 [ dbSNP | Ensembl ]. | VAR_055828 | |||||||||||||||||||||||
| Natural variant | 1379 | 1 | R → W. Corresponds to variant rs17681908 [ dbSNP | Ensembl ]. | VAR_055829 | |||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||
| Sequence conflict | 95 | 1 | V → E in BAF83755. Ref.3 | ||||||||||||||||||||||||
| Sequence conflict | 778 | 1 | N → S in BAF83755. Ref.3 | ||||||||||||||||||||||||
| Sequence conflict | 1101 | 1 | G → R in BAF83755. Ref.3 | ||||||||||||||||||||||||
| Sequence conflict | 1333 | 1 | V → L in BAH13890. Ref.3 | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 1479 – 1482 | 4 | |||||||||||||||||||||||||
| Helix | 1483 – 1488 | 6 | |||||||||||||||||||||||||
| Beta strand | 1491 – 1495 | 5 | |||||||||||||||||||||||||
| Helix | 1500 – 1505 | 6 | |||||||||||||||||||||||||
| Beta strand | 1506 – 1512 | 7 | |||||||||||||||||||||||||
| Beta strand | 1518 – 1525 | 8 | |||||||||||||||||||||||||
| Beta strand | 1528 – 1536 | 9 | |||||||||||||||||||||||||
| Helix | 1537 – 1545 | 9 | |||||||||||||||||||||||||
| Beta strand | 1550 – 1554 | 5 | |||||||||||||||||||||||||
| Beta strand | 1557 – 1560 | 4 | |||||||||||||||||||||||||
| Helix | 1561 – 1569 | 9 | |||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The Ras GTPase-activating-protein-related human protein IQGAP2 harbors a potential actin binding domain and interacts with calmodulin and Rho family GTPases." Brill S., Li S., Lyman C.W., Church D.M., Wasmuth J.J., Weissbach L., Bernards A., Snijders A.J. Mol. Cell. Biol. 16:4869-4878(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANTS GLU-527; GLU-532; PHE-629 AND VAL-724. Tissue: Liver. |
| [2] | "Cloning and characterization of a novel isoform of IQGAP2 in human adult testis." Wang H., Huo R., Xu Z.Y., Xu M., Li J.M., Zhou Z.M., Sha J.H. Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), VARIANTS GLU-527; GLU-532; PHE-629 AND VAL-724. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2), VARIANTS GLU-527 AND GLU-532. Tissue: Teratocarcinoma and Testis. |
| [4] | "The DNA sequence and comparative analysis of human chromosome 5." Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S., Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M., She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S. Rubin E.M.Nature 431:268-274(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides." Gevaert K., Goethals M., Martens L., Van Damme J., Staes A., Thomas G.R., Vandekerckhove J. Nat. Biotechnol. 21:566-569(2003) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 2-13. Tissue: Platelet. |
| [6] | "Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography." Han G., Ye M., Zhou H., Jiang X., Feng S., Jiang X., Tian R., Wan D., Zou H., Gu J. Proteomics 8:1346-1361(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Liver. |
| [7] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [8] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-16, MASS SPECTROMETRY. |
| [9] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] PHE-629, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | U51903 mRNA. Translation: AAB37765.1. AY351902 mRNA. Translation: AAQ81291.1. AK291066 mRNA. Translation: BAF83755.1. AK303054 mRNA. Translation: BAH13890.1. AC025188 Genomic DNA. No translation available. AC026706 Genomic DNA. No translation available. AC026725 Genomic DNA. No translation available. AC093251 Genomic DNA. No translation available. AC112173 Genomic DNA. No translation available. | ||||||||||||||||||
| IPI | IPI00299048. IPI00871809. | ||||||||||||||||||
| RefSeq | NP_006624.2. NM_006633.2. | ||||||||||||||||||
| UniGene | Hs.291030. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ProteinModelPortal | Q13576. | ||||||||||||||||||
| SMR | Q13576. Positions 23-207, 875-1252, 1477-1571. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| DIP | DIP-27542N. | ||||||||||||||||||
| IntAct | Q13576. 10 interactions. | ||||||||||||||||||
| MINT | MINT-5004527. | ||||||||||||||||||
| STRING | 9606.ENSP00000274364. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q13576. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 292495090. | ||||||||||||||||||
2D gel databases | |||||||||||||||||||
| OGP | Q13576. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | Q13576. | ||||||||||||||||||
| PRIDE | Q13576. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| DNASU | 10788. | ||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000274364; ENSP00000274364; ENSG00000145703. ENST00000396234; ENSP00000379535; ENSG00000145703. | ||||||||||||||||||
| GeneID | 10788. | ||||||||||||||||||
| KEGG | hsa:10788. | ||||||||||||||||||
| UCSC | uc003kek.3. human. uc003kel.3. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 10788. | ||||||||||||||||||
| GeneCards | GC05P075699. | ||||||||||||||||||
| HGNC | HGNC:6111. IQGAP2. | ||||||||||||||||||
| HPA | CAB004241. | ||||||||||||||||||
| MIM | 605401. gene. | ||||||||||||||||||
| neXtProt | NX_Q13576. | ||||||||||||||||||
| PharmGKB | PA29911. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | COG5261. | ||||||||||||||||||
| HOGENOM | HOG000004842. | ||||||||||||||||||
| HOVERGEN | HBG052143. | ||||||||||||||||||
| InParanoid | Q13576. | ||||||||||||||||||
| KO | K05767. | ||||||||||||||||||
| OMA | PEEMKHS. | ||||||||||||||||||
| OrthoDB | EOG4P8FH6. | ||||||||||||||||||
| PhylomeDB | Q13576. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q13576. | ||||||||||||||||||
| Bgee | Q13576. | ||||||||||||||||||
| CleanEx | HS_IQGAP2. | ||||||||||||||||||
| Genevestigator | Q13576. | ||||||||||||||||||
| GermOnline | ENSG00000145703. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 1.10.418.10. 1 hit. 1.10.506.10. 2 hits. | ||||||||||||||||||
| InterPro | IPR001715. CH-domain. IPR000048. IQ_motif_EF-hand-BS. IPR027417. P-loop_NTPase. IPR001936. RasGAP. IPR000593. RasGAP_C. IPR023152. RasGAP_CS. IPR008936. Rho_GTPase_activation_prot. IPR001202. WW_dom. [Graphical view] | ||||||||||||||||||
| Pfam | PF00307. CH. 1 hit. PF00612. IQ. 2 hits. PF00616. RasGAP. 1 hit. PF03836. RasGAP_C. 1 hit. [Graphical view] | ||||||||||||||||||
| SMART | SM00033. CH. 1 hit. SM00015. IQ. 3 hits. SM00323. RasGAP. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF47576. Calponin-homology. 1 hit. SSF48350. Rho_GAP. 1 hit. SSF52540. SSF52540. 1 hit. | ||||||||||||||||||
| PROSITE | PS50021. CH. 1 hit. PS50096. IQ. 3 hits. PS00509. RAS_GTPASE_ACTIV_1. 1 hit. PS50018. RAS_GTPASE_ACTIV_2. 1 hit. PS01159. WW_DOMAIN_1. 1 hit. PS50020. WW_DOMAIN_2. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| EvolutionaryTrace | Q13576. | ||||||||||||||||||
| GenomeRNAi | 10788. | ||||||||||||||||||
| NextBio | 40978. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | IQGA2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q13576 Secondary accession number(s): A8K4V1, B7Z8A4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 5 Human chromosome 5: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
