Q13459 (MYO9B_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 137.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Unconventional myosin-IXb Alternative name(s): Unconventional myosin-9b | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2157 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho. |
| Subcellular location | Cytoplasm › cell cortex. Cytoplasm › perinuclear region. Cytoplasm › cytoskeleton. Note: In undifferentiated cells colocalizes with F-actin in the cell periphery while in differentiated cells its localization is cytoplasmic with the highest levels in the perinuclear region. |
| Tissue specificity | Expressed predominantly in peripheral blood leukocytes and at lower levels, in thymus, spleen, testis, prostate, ovary, brain, small intestine and lung. |
| Involvement in disease | Celiac disease 4 (CELIAC4) [MIM:609753]: A multifactorial, chronic disorder of the small intestine caused by intolerance to gluten. It is characterized by immune-mediated enteropathy associated with failed intestinal absorption, and malnutrition. In predisposed individuals, the ingestion of gluten-containing food such as wheat and rye induces a flat jejunal mucosa with infiltration of lymphocytes. |
| Sequence similarities | Contains 4 IQ domains. Contains 1 myosin head-like domain. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 Ras-associating domain. Contains 1 Rho-GAP domain. |
| Caution | Represents a unconventional myosin. This protein should not be confused with the conventional myosin-9 (MYH9). |
| Sequence caution | The sequence AAC50402.1 differs from that shown. Reason: The C-terminal sequence from position 1917 onwards appears to be not correctly spliced. The sequence BAA92132.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ARFGEF1 | Q9Y6D6 | 2 | EBI-6251250,EBI-1044254 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform Long (identifier: Q13459-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform Short (identifier: Q13459-2) The sequence of this isoform differs from the canonical sequence as follows: 2021-2022: PP → QY 2023-2157: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2157 | 2157 | Unconventional myosin-IXb | PRO_0000123469 | |||||
Regions | |||||||||
| Domain | 1 – 939 | 939 | Myosin head-like | ||||||
| Domain | 15 – 114 | 100 | Ras-associating | ||||||
| Domain | 957 – 977 | 21 | IQ 1 | ||||||
| Domain | 979 – 1000 | 22 | IQ 2 | ||||||
| Domain | 1001 – 1023 | 23 | IQ 3 | ||||||
| Domain | 1024 – 1053 | 30 | IQ 4 | ||||||
| Domain | 1703 – 1888 | 186 | Rho-GAP | ||||||
| Nucleotide binding | 239 – 246 | 8 | ATP Potential | ||||||
| Zinc finger | 1632 – 1681 | 50 | Phorbol-ester/DAG-type | ||||||
| Region | 844 – 855 | 12 | Actin-binding | ||||||
| Region | 940 – 1044 | 105 | Neck or regulatory domain | ||||||
| Region | 1045 – 2157 | 1113 | Tail | ||||||
| Coiled coil | 1046 – 1071 | 26 | Potential | ||||||
| Coiled coil | 1880 – 1901 | 22 | Potential | ||||||
| Coiled coil | 1959 – 1989 | 31 | Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 716 | 1 | Phosphoserine Ref.11 | ||||||
| Modified residue | 1242 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 1267 | 1 | Phosphoserine Ref.9 Ref.13 Ref.16 | ||||||
| Modified residue | 1271 | 1 | Phosphothreonine Ref.9 Ref.13 Ref.16 | ||||||
| Modified residue | 1290 | 1 | Phosphoserine Ref.8 Ref.9 Ref.10 Ref.11 Ref.12 Ref.14 Ref.16 | ||||||
| Modified residue | 1323 | 1 | Phosphoserine Ref.14 | ||||||
| Modified residue | 1346 | 1 | Phosphothreonine Ref.14 | ||||||
| Modified residue | 1348 | 1 | Phosphothreonine By similarity | ||||||
| Modified residue | 1354 | 1 | Phosphoserine Ref.11 Ref.16 | ||||||
| Modified residue | 1405 | 1 | Phosphoserine Ref.10 | ||||||
| Modified residue | 1992 | 1 | Phosphoserine Ref.11 Ref.12 Ref.13 Ref.16 | ||||||
Natural variations | |||||||||
| Alternative sequence | 2021 – 2022 | 2 | PP → QY in isoform Short. | VSP_003361 | |||||
| Alternative sequence | 2023 – 2157 | 135 | Missing in isoform Short. | VSP_003362 | |||||
Experimental info | |||||||||
| Sequence conflict | 237 – 238 | 2 | IS → YP in AAC50402. Ref.1 | ||||||
| Sequence conflict | 276 | 1 | G → C in AAC50402. Ref.1 | ||||||
| Sequence conflict | 1011 | 1 | S → A in AAC50402. Ref.1 | ||||||
| Sequence conflict | 1693 | 1 | V → A in AAC50402. Ref.1 | ||||||
| Sequence conflict | 1946 | 1 | L → P in BAA92132. Ref.4 | ||||||
| Sequence conflict | 2039 – 2044 | 6 | TVAAPP → PWPPLH in AAC26597. Ref.3 | ||||||
| Sequence conflict | 2048 | 1 | P → L in AAC26597. Ref.3 | ||||||
| Sequence conflict | 2066 | 1 | P → S in AAC26597. Ref.3 | ||||||
| Sequence conflict | 2156 – 2157 | 2 | NG → MAESHS in AAC26597. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Human myosin-IXb, an unconventional myosin with a chimerin-like rho/rac GTPase-activating protein domain in its tail." Wirth J.A., Jensen K.A., Post P.L., Bement W.M., Mooseker M.S. J. Cell Sci. 109:653-661(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM LONG/SHORT). Tissue: Liver and Small intestine. |
| [2] | "The DNA sequence and biology of human chromosome 19." Grimwood J., Gordon L.A., Olsen A.S., Terry A., Schmutz J., Lamerdin J.E., Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., Carrano A.V. Lucas S.M.Nature 428:529-535(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "Cloning of the murine unconventional myosin gene Myo9b and identification of alternative splicing." Grewal P.K., Jones A.-M., Maconochie M., Lemmers R.J.F., Frants R.R., Hewitt J.E. Gene 240:389-398(1999) [PubMed] [Europe PMC] [Abstract] Cited for: PARTIAL NUCLEOTIDE SEQUENCE [MRNA], ALTERNATIVE SPLICING. |
| [4] | "Human myosin-IXb is a mechanochemically active motor and a GAP for rho." Post P.L., Bokoch G.M., Mooseker M.S. J. Cell Sci. 111:941-950(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1940-2157 (ISOFORM LONG). |
| [5] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1828-2022 (ISOFORM SHORT). Tissue: Placenta. |
| [6] | "Myosin IXB variant increases the risk of celiac disease and points toward a primary intestinal barrier defect." Monsuur A.J., de Bakker P.I., Alizadeh B.Z., Zhernakova A., Bevova M.R., Strengman E., Franke L., van't Slot R., van Belzen M.J., Lavrijsen I.C., Diosdado B., Daly M.J., Mulder C.J., Mearin M.L., Meijer J.W., Meijer G.A., van Oort E., Wapenaar M.C., Koeleman B.P., Wijmenga C. Nat. Genet. 37:1341-1344(2005) [PubMed] [Europe PMC] [Abstract] Cited for: ASSOCIATION WITH CELIAC DISEASE 4. |
| [7] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [8] | "Phosphorylation analysis of primary human T lymphocytes using sequential IMAC and titanium oxide enrichment." Carrascal M., Ovelleiro D., Casas V., Gay M., Abian J. J. Proteome Res. 7:5167-5176(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1290, MASS SPECTROMETRY. Tissue: T-cell. |
| [9] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1267; THR-1271 AND SER-1290, MASS SPECTROMETRY. Tissue: Platelet. |
| [10] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1290 AND SER-1405, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-716; SER-1290; SER-1354 AND SER-1992, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [12] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1290 AND SER-1992, MASS SPECTROMETRY. |
| [13] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1267; THR-1271 AND SER-1992, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [14] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1290; SER-1323 AND THR-1346, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [15] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [16] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1267; THR-1271; SER-1290; SER-1354 AND SER-1992, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Web resources
| Wikipedia MYO9B entry |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U42391 mRNA. Translation: AAC50402.1. Sequence problems. AC020913 Genomic DNA. No translation available. AC020908 Genomic DNA. No translation available. AF143684 mRNA. Translation: AAF00119.1. AF020267 mRNA. Translation: AAC26597.1. AK002201 mRNA. Translation: BAA92132.1. Different initiation. |
| IPI | IPI00306933. IPI00336047. |
| RefSeq | NP_004136.2. NM_004145.3. |
| UniGene | Hs.123198. Hs.736097. |
3D structure databases | |
| ProteinModelPortal | Q13459. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q13459. 7 interactions. |
| MINT | MINT-1419073. |
| STRING | 9606.ENSP00000380444. |
PTM databases | |
| PhosphoSite | Q13459. |
Polymorphism databases | |
| DMDM | 14548118. |
Proteomic databases | |
| PaxDb | Q13459. |
| PRIDE | Q13459. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000397274; ENSP00000380444; ENSG00000099331. ENST00000595618; ENSP00000471457; ENSG00000099331. |
| GeneID | 4650. |
| KEGG | hsa:4650. |
| UCSC | uc002nfi.3. human. uc002nfj.1. human. |
Organism-specific databases | |
| CTD | 4650. |
| GeneCards | GC19P017186. |
| HGNC | HGNC:7609. MYO9B. |
| HPA | CAB037190. HPA042043. |
| MIM | 602129. gene. 609753. phenotype. |
| neXtProt | NX_Q13459. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG5022. |
| HOGENOM | HOG000113707. |
| HOVERGEN | HBG052558. |
| InParanoid | Q13459. |
| KO | K10360. |
| OMA | HLHIYPQ. |
| OrthoDB | EOG408N75. |
Enzyme and pathway databases | |
| Reactome | REACT_111102. Signal Transduction. |
Gene expression databases | |
| ArrayExpress | Q13459. |
| Bgee | Q13459. |
| CleanEx | HS_MYO9B. |
| Genevestigator | Q13459. |
| GermOnline | ENSG00000099331. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.10.555.10. 1 hit. |
| InterPro | IPR000048. IQ_motif_EF-hand-BS. IPR001609. Myosin_head_motor_dom. IPR002219. Prot_Kinase_C-like_PE/DAG-bd. IPR000159. Ras-assoc. IPR008936. Rho_GTPase_activation_prot. IPR000198. RhoGAP_dom. [Graphical view] |
| Pfam | PF00612. IQ. 4 hits. PF00063. Myosin_head. 1 hit. PF00788. RA. 1 hit. PF00620. RhoGAP. 1 hit. [Graphical view] |
| PRINTS | PR00193. MYOSINHEAVY. |
| SMART | SM00109. C1. 1 hit. SM00015. IQ. 4 hits. SM00242. MYSc. 1 hit. SM00314. RA. 1 hit. SM00324. RhoGAP. 1 hit. [Graphical view] |
| SUPFAM | SSF48350. Rho_GAP. 1 hit. |
| PROSITE | PS50096. IQ. 3 hits. PS50200. RA. 1 hit. PS50238. RHOGAP. 1 hit. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | MYO9B. human. |
| GenomeRNAi | 4650. |
| NextBio | 17928. |
| SOURCE | Search... |
Entry information
| Entry name | MYO9B_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q13459 Secondary accession number(s): O75314, Q9NUJ2, Q9UHN0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
